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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) (Chromatium vinosum)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei145 – 1451UniRule annotation
Active sitei588 – 5881UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciAVIN572477:GCJK-3051-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Alvin_2986Imported
OrganismiAllochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) (Chromatium vinosum)Imported
Taxonomic identifieri572477 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeAllochromatium
ProteomesiUP000001441: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000238647.
KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3RRH5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNEHPQAQTL ERDIQLYTAL LGEVLREHSR KRVLVVVERL RDGFMQLREQ
60 70 80 90 100
EDPELREKLM KRIQSLDPQT LAEVIRAFTL YFGLVNVAEE LNAHLARMDV
110 120 130 140 150
IAAGERLWVG SFDDTVRQFK EDGVSPEHFQ SLLEHLIYLP VFTAHPTEAR
160 170 180 190 200
RRTISETFRR IFLAGQDLHR LKLNEEELED KLQEILTQIQ ILWKTDEVRV
210 220 230 240 250
HKPQVTDEIR RGLHFFRESL FEAVPRVYRF LEKAVRRNYG AGCGIRVPSF
260 270 280 290 300
IRFGSWIGGD RDGNPFVKPE TTELAVRMHA ELILEAYLER LQDLSRMLSH
310 320 330 340 350
SSALCQPSPA FLDSLDADEE YWVGVMGQRQ RRFLYEPYRR KLTMMGHRLQ
360 370 380 390 400
ANLDRIRRRM EGLSDDGLPD GYAGAADFLA DLMLIRDSLI HHGDASAADG
410 420 430 440 450
PLQDLIRLAE TFGFHLVHLD IRQESTRHTQ AVTELFARQP GAPFYQAFNE
460 470 480 490 500
EQRLMALAEA IAHPHPFIID KATLTPETRE TLETFEVIAR MRAEVGERVF
510 520 530 540 550
GQYVISMTHA ASHVMEVMLL ARLAGLVGVD NRGWFCTLQV SPLFETIEDL
560 570 580 590 600
SHIDRVMSTL FDDPTYLALL RASGNQQEVM LGYSDSCKDG GILASSWKLF
610 620 630 640 650
EAQKKVIALA DDRGVACRLF HGRGGTVGRG GGPTHEAILA QPVDTVHGQI
660 670 680 690 700
KFTEQGEVLS YRYANPETAR YELTMGISGL IKASRCLIEP PEPERNDYLA
710 720 730 740 750
IMDELARHGE AAYRGLVRDT EGFLDYFYEC TPLDGIALLN IGSRPAHRKK
760 770 780 790 800
ADRSLASIRA IPWVFGWGQA RVTLPAWFSI GQAIERYRGH DVERLAKLQR
810 820 830 840 850
MYQEWPYFRA LLSNTQMSLF KAEMHIAREY LRLAEDRERA AQILGLIEEE
860 870 880 890 900
YQRTLVQVLN VAGLLALMDE TPELRHSLAR RNLYLDPLNH IQVALLERYR
910 920 930
SEEDEAKREE WLDPLLRSIN ALSAGMRNTG
Length:930
Mass (Da):106,490
Last modified:April 20, 2010 - v1
Checksum:iF59D62D88CB448A0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001896 Genomic DNA. Translation: ADC63887.1.
RefSeqiYP_003444919.1. NC_013851.1.

Genome annotation databases

EnsemblBacteriaiADC63887; ADC63887; Alvin_2986.
GeneIDi8788377.
KEGGialv:Alvin_2986.
PATRICi31925740. VBIAllVin64954_2941.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001896 Genomic DNA. Translation: ADC63887.1.
RefSeqiYP_003444919.1. NC_013851.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADC63887; ADC63887; Alvin_2986.
GeneIDi8788377.
KEGGialv:Alvin_2986.
PATRICi31925740. VBIAllVin64954_2941.

Phylogenomic databases

HOGENOMiHOG000238647.
KOiK01595.

Enzyme and pathway databases

BioCyciAVIN572477:GCJK-3051-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Allochromatium vinosum DSM 180."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Zigann R., Dahl C., Woyke T.
    Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 17899 / DSM 180 / NBRC 103801 / DImported.

Entry informationi

Entry nameiD3RRH5_ALLVD
AccessioniPrimary (citable) accession number: D3RRH5
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: February 4, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.