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D3R0W6 (D3R0W6_CLOB3) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Type I restriction modification DNA specificity domain protein EMBL ADC91196.1
Gene names
Ordered Locus Names:HMPREF0868_0493
OrganismClostridiales genomosp. BVAB3 (strain UPII9-5) [Complete proteome] [HAMAP]
Taxonomic identifier699246 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales ›

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA modification

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D3R0W6 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: 3C56BC16EDB95F54

FASTA39644,901
        10         20         30         40         50         60 
MTDWENIELG NICEVVRGGS PRPIIDYITD EPDGVNWLKI GDVKETDKFF THANEKIKPS 

        70         80         90        100        110        120 
GIPKTREVKA GDLILSNSMS FGRAFITLID GYIHDGWLRL RCDESRLDKE YLYYFLTSNL 

       130        140        150        160        170        180 
AQNQFKAIAT GSVVNNLKSD TVKAIKIDLP TLGEQKRIAE VLSMFDDKIK CNEEVNKNLE 

       190        200        210        220        230        240 
QQAQALYREM FVNTTNDQRR TCRAEEYFDI AIGKTPPRKE HQWFTTNPSD ATWVSISDMG 

       250        260        270        280        290        300 
SCGTYIIRSS EQLTQEAVDK FNIKVVPSNT VLLSFKLTVG RIAITHGEMI TNEAIAHFKT 

       310        320        330        340        350        360 
DKAFINEYLY CYLRDFNYQT MGSTSSIAIA VNSKIIKAMP FVIPADDEIS RFHSVVGPMF 

       370        380        390 
EQILNNQLEN DSLADLRDTL LPRLMSGEID VSDIDP

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References

[1]"Sequence of Clostridiales genomosp. BVAB3 str. UPII9-5."
Madupu R., Durkin A.S., Torralba M., Methe B., Sutton G.G., Strausberg R.L., Nelson K.E.
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: UPII9-5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001850 Genomic DNA. Translation: ADC91196.1.
RefSeqYP_003474823.1. NC_013895.2.

3D structure databases

ModBaseSearch...

Protein family/group databases

REBASE24476. S1.CgeBVORF489P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADC91196; ADC91196; HMPREF0868_0493.
GeneID8810664.
KEGGclo:HMPREF0868_0493.
PATRIC35309512. VBICloGen152872_0491.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000002669.
KOK01154.

Enzyme and pathway databases

BioCycCGEN699246:GI5D-1226-MONOMER.

Family and domain databases

InterProIPR000055. Restrct_endonuc_typeI_HsdS.
[Graphical view]
PfamPF01420. Methylase_S. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD3R0W6_CLOB3
AccessionPrimary (citable) accession number: D3R0W6
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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