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D3QWU8 (D3QWU8_ECOCB) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:amyA EMBL ADD56938.1
Ordered Locus Names:G2583_2378 EMBL ADD56938.1
OrganismEscherichia coli O55:H7 (strain CB9615 / EPEC) [Complete proteome] [HAMAP] EMBL ADD56938.1
Taxonomic identifier701177 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length495 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D3QWU8 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: F73E9657A8C36F46

FASTA49556,612
        10         20         30         40         50         60 
MRNPTLLQCF HWYYPEGGKL WPELAERADG FNDIGINMVW LPPAYKGASG GYSVGYDSYD 

        70         80         90        100        110        120 
LFDLGEFDQK GSIPTKYGDK VQLLAAIDAL KRNDIAVLLD VVVNHKMGAD EKEAIRVQRV 

       130        140        150        160        170        180 
NADDRTQIDE EIIECEGWTR YTFPARAGQY SQFIWDFKCF SGIDHIENPN EDGIFKIVND 

       190        200        210        220        230        240 
YTGEGWNDQV DDELGNFDYL MGENIDFRNH AVTEEIKYWA RWVMEQTQCD GFRLDAVKHI 

       250        260        270        280        290        300 
PAWFYKEWIE HVQEVAPKPL FIVAEYWSHE VDKLQTYIDQ VEGKTMLFDA PLQMKFHEAS 

       310        320        330        340        350        360 
RMGRNYDMTQ IFTGTLVEAD PFHAVTLVAN HDTQPLQALE APVEPWFKPL AYALILLREN 

       370        380        390        400        410        420 
GVPSVFYPDL YGAHYEDVGG DGQTYPIDMP IIEQLDELIL ARQRFAHGVQ TLFFDHPNCI 

       430        440        450        460        470        480 
AFSRSGTDEY PGCVVVMSNG DDGEKTIHLG ENYGNKTWRD FLGNRQESVV TDENGEATFF 

       490 
CNGGSVSVWV IEEVL 

« Hide

References

[1]"Derivation of Escherichia coli O157:H7 from its O55:H7 precursor."
Zhou Z., Li X., Liu B., Beutin L., Xu J., Ren Y., Feng L., Lan R., Reeves P.R., Wang L.
PLoS ONE 5:E8700-E8700(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CB9615 / EPEC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001846 Genomic DNA. Translation: ADD56938.1.
RefSeqYP_003499922.1. NC_013941.1.

3D structure databases

ProteinModelPortalD3QWU8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADD56938; ADD56938; G2583_2378.
GeneID8871338.
KEGGeok:G2583_2378.
PATRIC35343809. VBIEscCol154499_2385.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000094847.
KOK01176.
OMARATKYGD.

Enzyme and pathway databases

BioCycECOL701177:GI1N-2377-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD3QWU8_ECOCB
AccessionPrimary (citable) accession number: D3QWU8
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 14, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)