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D3QV02

- D3QV02_ECOCB

UniProt

D3QV02 - D3QV02_ECOCB

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Protein
Submitted name:

Alpha-amylase, periplasmic

Gene
malS, G2583_4313
Organism
Escherichia coli O55:H7 (strain CB9615 / EPEC)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciECOL701177:GI1N-4315-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylase, periplasmicImported
Gene namesi
Name:malSImported
Ordered Locus Names:G2583_4313Imported
OrganismiEscherichia coli O55:H7 (strain CB9615 / EPEC)Imported
Taxonomic identifieri701177 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000001521: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliD3QV02.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000273912.
KOiK01176.
OMAiGQNWHSF.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

D3QV02-1 [UniParc]FASTAAdd to Basket

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MKLAACFLTL LPGFAVAASW TSPGFPAFSE QGTGTFVSHA QLPKGTRPLT    50
LNFDQQCWQP ADAIKLNQML SLQPCSNTPP QWRLFRDGKY TLQIDTRSGT 100
PTLMISIQNA AEPVANLVRE CPKWDGLPLT LDVSATFPEG AAVRDYYSQQ 150
IAIVKNGQIT LQPAATSNGL LLLERAETDA SAPFDWHNAT VYFVLTDRFE 200
NGDPSNDQSY GRHKDGMAEI GTFHGGDLRG LTNKLDYLQQ LGVNALWISA 250
PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGNE ADLRTLVDSA 300
HQRGIRILFD VVMNHTGYAT LADMQEYQFG ALYLSGDEVK KTLGERWSDW 350
KPAAGQTWHS FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS 400
LAFLPDIKTE STTASGLPVF YKNKTDTHAK AIDGFTPRDY LTHWLSQWVR 450
DYGIDGFRVD TAKHVELPAW QQLKTEASAA LREWKKANPD KALDDKPFWM 500
TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCIAQ MDTTWQQMAE 550
KLQGFNVLSY LSSHDTRLFR EGGDKAAELL LLAPGAVQIF YGDESSRPFG 600
PTGSDPLQGT RSDMNWQDVS GKSAANVAHW QKISQFRARH PAIGAGKQTT 650
LSLKQGYGFV REHGDDKVLV IWAGQQ 676
Length:676
Mass (Da):75,676
Last modified:April 20, 2010 - v1
Checksum:iFCB885C458F8404F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001846 Genomic DNA. Translation: ADD58782.1.
RefSeqiYP_003501766.1. NC_013941.1.

Genome annotation databases

EnsemblBacteriaiADD58782; ADD58782; G2583_4313.
GeneIDi8873276.
KEGGieok:G2583_4313.
PATRICi35347801. VBIEscCol154499_4336.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001846 Genomic DNA. Translation: ADD58782.1 .
RefSeqi YP_003501766.1. NC_013941.1.

3D structure databases

ProteinModelPortali D3QV02.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADD58782 ; ADD58782 ; G2583_4313 .
GeneIDi 8873276.
KEGGi eok:G2583_4313.
PATRICi 35347801. VBIEscCol154499_4336.

Phylogenomic databases

HOGENOMi HOG000273912.
KOi K01176.
OMAi GQNWHSF.

Enzyme and pathway databases

BioCyci ECOL701177:GI1N-4315-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Derivation of Escherichia coli O157:H7 from its O55:H7 precursor."
    Zhou Z., Li X., Liu B., Beutin L., Xu J., Ren Y., Feng L., Lan R., Reeves P.R., Wang L.
    PLoS ONE 5:E8700-E8700(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CB9615 / EPEC.

Entry informationi

Entry nameiD3QV02_ECOCB
AccessioniPrimary (citable) accession number: D3QV02
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 14, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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