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D3QV02 (D3QV02_ECOCB) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:malS EMBL ADD58782.1
Ordered Locus Names:G2583_4313 EMBL ADD58782.1
OrganismEscherichia coli O55:H7 (strain CB9615 / EPEC) [Complete proteome] [HAMAP] EMBL ADD58782.1
Taxonomic identifier701177 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length676 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D3QV02 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: FCB885C458F8404F

FASTA67675,676
        10         20         30         40         50         60 
MKLAACFLTL LPGFAVAASW TSPGFPAFSE QGTGTFVSHA QLPKGTRPLT LNFDQQCWQP 

        70         80         90        100        110        120 
ADAIKLNQML SLQPCSNTPP QWRLFRDGKY TLQIDTRSGT PTLMISIQNA AEPVANLVRE 

       130        140        150        160        170        180 
CPKWDGLPLT LDVSATFPEG AAVRDYYSQQ IAIVKNGQIT LQPAATSNGL LLLERAETDA 

       190        200        210        220        230        240 
SAPFDWHNAT VYFVLTDRFE NGDPSNDQSY GRHKDGMAEI GTFHGGDLRG LTNKLDYLQQ 

       250        260        270        280        290        300 
LGVNALWISA PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGNE ADLRTLVDSA 

       310        320        330        340        350        360 
HQRGIRILFD VVMNHTGYAT LADMQEYQFG ALYLSGDEVK KTLGERWSDW KPAAGQTWHS 

       370        380        390        400        410        420 
FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS LAFLPDIKTE STTASGLPVF 

       430        440        450        460        470        480 
YKNKTDTHAK AIDGFTPRDY LTHWLSQWVR DYGIDGFRVD TAKHVELPAW QQLKTEASAA 

       490        500        510        520        530        540 
LREWKKANPD KALDDKPFWM TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCIAQ 

       550        560        570        580        590        600 
MDTTWQQMAE KLQGFNVLSY LSSHDTRLFR EGGDKAAELL LLAPGAVQIF YGDESSRPFG 

       610        620        630        640        650        660 
PTGSDPLQGT RSDMNWQDVS GKSAANVAHW QKISQFRARH PAIGAGKQTT LSLKQGYGFV 

       670 
REHGDDKVLV IWAGQQ 

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References

[1]"Derivation of Escherichia coli O157:H7 from its O55:H7 precursor."
Zhou Z., Li X., Liu B., Beutin L., Xu J., Ren Y., Feng L., Lan R., Reeves P.R., Wang L.
PLoS ONE 5:E8700-E8700(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CB9615 / EPEC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001846 Genomic DNA. Translation: ADD58782.1.
RefSeqYP_003501766.1. NC_013941.1.

3D structure databases

ProteinModelPortalD3QV02.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADD58782; ADD58782; G2583_4313.
GeneID8873276.
KEGGeok:G2583_4313.
PATRIC35347801. VBIEscCol154499_4336.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000273912.
KOK01176.
OMAGQNWHSF.

Enzyme and pathway databases

BioCycECOL701177:GI1N-4315-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameD3QV02_ECOCB
AccessionPrimary (citable) accession number: D3QV02
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 14, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)