D3QQ94 (D3QQ94_ECOCB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase III, delta subunit EMBL ADD55953.1

Gene names

Name:	holB EMBL ADD55953.1
Ordered Locus Names:	G2583_1359 EMBL ADD55953.1

Organism

Escherichia coli O55:H7 (strain CB9615 / EPEC) [Complete proteome] [HAMAP] EMBL ADD55953.1

Taxonomic identifier

701177 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli › Escherichia coli O55:H7

Protein attributes

Sequence length	334 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA replication Inferred from electronic annotation. Source: InterPro
Cellular_component	DNA polymerase III complex Inferred from electronic annotation. Source: InterPro
Molecular_function	3'-5' exonuclease activity Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA-directed DNA polymerase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3QQ94 [UniParc]. Last modified April 20, 2010. Version 1. Checksum: C10DAA644F54D151	FASTA	334	36,951
	10 20 30 40 50 60 MRWYPWLRPD FEKLVASYQA GRGHHALLIQ ALPGMGDDAL IYALSRYLLC QQPQGHKSCG 70 80 90 100 110 120 HCRGCQLMQA GTHPDYYTLA PEKGKNTLGI DAVREVTEKL NEHARLGGAK VVWVTDAALL 130 140 150 160 170 180 TDAAANALLK TLEEPPAETW FFLATREPER LLATLRSRCR LHYLAPPPEQ YAVTWLSREV 190 200 210 220 230 240 TMSQDALLAA LRLSAGSPGA ALALFQGDNW QARETLCQAL AYSVPSGDWY SLLAALNHEQ 250 260 270 280 290 300 APARLHWLAT LLMDALKRHH GAAQVTNVDV PGLVAELANH LSPSRLQAIL GDVCHIREQL 310 320 330 MSVTGINREL LITDLLLRIE HYLQPGVVLP VPHL

References

[1]	"Derivation of Escherichia coli O157:H7 from its O55:H7 precursor." Zhou Z., Li X., Liu B., Beutin L., Xu J., Ren Y., Feng L., Lan R., Reeves P.R., Wang L. PLoS ONE 5:E8700-E8700(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CB9615 / EPEC.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001846 Genomic DNA. Translation: ADD55953.1.
RefSeq	YP_003498937.1. NC_013941.1.
3D structure databases
ProteinModelPortal	D3QQ94.
SMR	D3QQ94. Positions 1-334.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADD55953; ADD55953; G2583_1359.
GeneID	8870318.
KEGG	eok:G2583_1359.
PATRIC	35341716. VBIEscCol154499_1350.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000192595.
KO	K02341.
Enzyme and pathway databases
BioCyc	ECOL701177:GI1N-1465-MONOMER.
Family and domain databases
InterPro	IPR008921. DNA_pol3_clamp-load_cplx_C. IPR004622. DNA_pol_HolB. IPR015199. DNA_pol_III_delta_C. [Graphical view]
Pfam	PF09115. DNApol3-delta_C. 1 hit. [Graphical view]
SUPFAM	SSF48019. Pol_clamp_load_C. 1 hit.
TIGRFAMs	TIGR00678. holB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D3QQ94_ECOCB

Accession

Primary (citable) accession number: D3QQ94

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 20, 2010
Last modified:	May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)