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D3QPL3

- D3QPL3_ECOCB

UniProt

D3QPL3 - D3QPL3_ECOCB

Protein
Submitted name:

4-aminobutyrate transaminase

Gene

gabT

Organism
Escherichia coli O55:H7 (strain CB9615 / EPEC)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 4-aminobutyrate transaminase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. gamma-aminobutyric acid metabolic process Source: InterPro

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciECOL701177:GI1N-3311-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    4-aminobutyrate transaminaseImported
    Gene namesi
    Name:gabTImported
    Ordered Locus Names:G2583_3308Imported
    OrganismiEscherichia coli O55:H7 (strain CB9615 / EPEC)Imported
    Taxonomic identifieri701177 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000001521: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD3QPL3.
    SMRiD3QPL3. Positions 2-426.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000020206.
    KOiK07250.
    OMAiLDRCKAV.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF00202. Aminotran_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
    PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3QPL3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSSNKELMQR RSQAIPRGVG QIHPIFADRA ENCRVWDVEG REYLDFAGGI    50
    AVLNTGHLHP KVVAAVEAQL KKLSHTCFQV LAYEPYLELC EIMNQKVPGD 100
    FAKKTLLVTT GSEAVENAVK IARAATKRSG TIAFSGAYHG RTHYTLALTG 150
    KVNPYSAGMG LMPGHVYRAL YPCPLHGISE DDAIASIHRI FKNDAAPEDI 200
    AAIVIEPVQG EGGFYAATPA FMQRLRALCD EHGIMLIADE VQSGAGRTGT 250
    LFAMEQMGVA PDLTTFAKSI AGGFPLAGVT GRAEVMDAVA PGGLGGTYAG 300
    NPIACVAALE VLKVFEQENL LQKANDLGQK LKDGLLAIAE KHPEIGDVRG 350
    LGAMIAIELF EDGDHNKPDA KLTAEIVARA RDKGLILLSC GPYYNVLRIL 400
    VPLTIEDAQI RQGLEIISQC FAEAKQ 426
    Length:426
    Mass (Da):45,702
    Last modified:April 20, 2010 - v1
    Checksum:i23DE5936B68129D8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001846 Genomic DNA. Translation: ADD57827.1.
    RefSeqiYP_003500811.1. NC_013941.1.

    Genome annotation databases

    EnsemblBacteriaiADD57827; ADD57827; G2583_3308.
    GeneIDi8872272.
    KEGGieok:G2583_3308.
    PATRICi35345730. VBIEscCol154499_3323.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001846 Genomic DNA. Translation: ADD57827.1 .
    RefSeqi YP_003500811.1. NC_013941.1.

    3D structure databases

    ProteinModelPortali D3QPL3.
    SMRi D3QPL3. Positions 2-426.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADD57827 ; ADD57827 ; G2583_3308 .
    GeneIDi 8872272.
    KEGGi eok:G2583_3308.
    PATRICi 35345730. VBIEscCol154499_3323.

    Phylogenomic databases

    HOGENOMi HOG000020206.
    KOi K07250.
    OMAi LDRCKAV.

    Enzyme and pathway databases

    BioCyci ECOL701177:GI1N-3311-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
    PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Derivation of Escherichia coli O157:H7 from its O55:H7 precursor."
      Zhou Z., Li X., Liu B., Beutin L., Xu J., Ren Y., Feng L., Lan R., Reeves P.R., Wang L.
      PLoS ONE 5:E8700-E8700(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CB9615 / EPECImported.

    Entry informationi

    Entry nameiD3QPL3_ECOCB
    AccessioniPrimary (citable) accession number: D3QPL3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3