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D3QCY0 (D3QCY0_STALH) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Alanine racemase HAMAP-Rule MF_01201

EC=5.1.1.1 HAMAP-Rule MF_01201
Gene names
Ordered Locus Names:SLGD_01492 EMBL ADC87583.1
OrganismStaphylococcus lugdunensis (strain HKU09-01) [Complete proteome] [HAMAP] EMBL ADC87583.1
Taxonomic identifier698737 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesStaphylococcus

Protein attributes

Sequence length358 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site301Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2571Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1221Substrate By similarity HAMAP-Rule MF_01201
Binding site3041Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue301N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
D3QCY0 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: 3FFEB75E478AB135

FASTA35841,337
        10         20         30         40         50         60 
MTATWSVNSD IFFNNVVTVK NNQPIMAVVK NNAYHYGLEY AVNMFLKAGI NTFSTTSLKE 

        70         80         90        100        110        120 
AVRIRKLAPK ATIFLMNAVY DFDIVRHNRI HMTLPSLQYY YANKSNLYDI NVHLEYENLL 

       130        140        150        160        170        180 
HRSGFKNLSE LREVLKDHEQ NNQPHKMHIT GLWTHFGYAD EFDVPEYDTE KRAWLKVLNT 

       190        200        210        220        230        240 
LLAEGYTFDM IHAQNSASFY REQHQVLSNH THARVGIALY GSRPYSSLKP SEIKQALTVK 

       250        260        270        280        290        300 
ANVIQVREVN KGDYCGYSFA YECKNHHTRL AVVDIGYGDG ILKSRAQHDV IINGKRYPIR 

       310        320        330        340        350 
ALMMSHMFVE VDELVHARDE VVLYNNDIRI DEFTFKGVGA NSEQLSAMNH DSLIKEYK 

« Hide

References

[1]"Complete genome sequence of Staphylococcus lugdunensis strain HKU09-01."
Tse H., Tsoi H.W., Leung S.P., Lau S.K., Woo P.C., Yuen K.Y.
J. Bacteriol. 192:1471-1472(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HKU09-01 EMBL ADC87583.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001837 Genomic DNA. Translation: ADC87583.1.
RefSeqYP_003471710.1. NC_013893.1.

3D structure databases

ProteinModelPortalD3QCY0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADC87583; ADC87583; SLGD_01492.
GeneID8819195.
KEGGslg:SLGD_01492.
PATRIC35306343. VBIStaLug155172_1430.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000280025.
KOK01775.
OMAAYHYGLE.

Enzyme and pathway databases

BioCycSLUG698737:GHG4-1489-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD3QCY0_STALH
AccessionPrimary (citable) accession number: D3QCY0
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: February 19, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)