D3QCY0 (D3QCY0_STALH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative alternative form of diaminopimelate epimerase EMBL ADC87583.1
EC=5.1.1.7 EMBL ADC87583.1

Gene names

Ordered Locus Names:

SLGD_01492

Organism

Staphylococcus lugdunensis (strain HKU09-01) [Complete proteome] [HAMAP] EMBL ADC87583.1

Taxonomic identifier

698737 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Staphylococcaceae › Staphylococcus › Staphylococcus lugdunensis

Protein attributes

Sequence length	358 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS000821

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS000821
Molecular function	Isomerase SAAS SAAS000821 EMBL ADC87583.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: InterPro diaminopimelate epimerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3QCY0 [UniParc]. Last modified April 20, 2010. Version 1. Checksum: 3FFEB75E478AB135	FASTA	358	41,337
	10 20 30 40 50 60 MTATWSVNSD IFFNNVVTVK NNQPIMAVVK NNAYHYGLEY AVNMFLKAGI NTFSTTSLKE 70 80 90 100 110 120 AVRIRKLAPK ATIFLMNAVY DFDIVRHNRI HMTLPSLQYY YANKSNLYDI NVHLEYENLL 130 140 150 160 170 180 HRSGFKNLSE LREVLKDHEQ NNQPHKMHIT GLWTHFGYAD EFDVPEYDTE KRAWLKVLNT 190 200 210 220 230 240 LLAEGYTFDM IHAQNSASFY REQHQVLSNH THARVGIALY GSRPYSSLKP SEIKQALTVK 250 260 270 280 290 300 ANVIQVREVN KGDYCGYSFA YECKNHHTRL AVVDIGYGDG ILKSRAQHDV IINGKRYPIR 310 320 330 340 350 ALMMSHMFVE VDELVHARDE VVLYNNDIRI DEFTFKGVGA NSEQLSAMNH DSLIKEYK

References

[1]	"Complete genome sequence of Staphylococcus lugdunensis strain HKU09-01." Tse H., Tsoi H.W., Leung S.P., Lau S.K., Woo P.C., Yuen K.Y. J. Bacteriol. 192:1471-1472(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HKU09-01.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001837 Genomic DNA. Translation: ADC87583.1.
RefSeq	YP_003471710.1. NC_013893.1.
3D structure databases
ProteinModelPortal	D3QCY0.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADC87583; ADC87583; SLGD_01492.
GeneID	8819195.
KEGG	slg:SLGD_01492.
PATRIC	35306343. VBIStaLug155172_1430.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000280025.
KO	K01775.
OMA	AYHYGLE.
Enzyme and pathway databases
BioCyc	SLUG698737:GHG4-1489-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D3QCY0_STALH

Accession

Primary (citable) accession number: D3QCY0

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 20, 2010
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)