D3QC37 (D3QC37_STANL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Binding-protein-dependent transport systems inner membrane component EMBL ADD39771.1

Gene names

Ordered Locus Names:

Snas_0049

Organism

Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) [Complete proteome] [HAMAP]

Taxonomic identifier

446470 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Glycomycineae › Glycomycetaceae › Stackebrandtia › Stackebrandtia nassauensis

Protein attributes

Sequence length	297 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Membrane; Multi-pass membrane protein By similarity RuleBase RU000478.
Sequence similarities	Belongs to the binding-protein-dependent transport system permease family. RuleBase RU000478

Ontologies

Keywords
Biological process	Transport RuleBase RU000478
Cellular component	Membrane
Domain	Transmembrane RuleBase RU000478
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3QC37 [UniParc]. Last modified April 20, 2010. Version 1. Checksum: C0C10785748DE560	FASTA	297	32,646
	10 20 30 40 50 60 MSIKNRQARS GWGFLAPFLV LFVAFFILPI LYAIYQSLFT VKRTGELGLG GQELSFSWFD 70 80 90 100 110 120 NYTTALSDTA FVDSLWTVLI FALIQVPVMV LLALTLALLL ESASARGVGF FRTAYFLPHG 130 140 150 160 170 180 VPGVIASILW GFLYVPGISP LYNLFESVGL SVDFISPDTI LLSIVNIVTW EFAGYNVLVL 190 200 210 220 230 240 IAQLKAVNPN LFEAARVDGA SPWRIIWHIK LPLARPAIVM ATVFTIVGSL QLFAEPLVLR 250 260 270 280 290 PVAASITYTY TPNLAAYNEA FFENNYQLAA AQAVVLAAVA MVLSFGFLRI FGRGDKQ

References

[1]

"Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21)." Munk C., Lapidus A., Copeland A., Jando M., Mayilraj S., Glavina Del Rio T., Nolan M., Chen F., Lucas S., Tice H., Cheng J.F., Han C., Detter J.C., Bruce D., Goodwin L., Chain P., Pitluck S., Goker M. , Ovchinnikova G., Pati A., Ivanova N., Mavromatis K., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P. Stand. Genomic Sci. 1:292-299(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001778 Genomic DNA. Translation: ADD39771.1.
RefSeq	YP_003508864.1. NC_013947.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADD39771; ADD39771; Snas_0049.
GeneID	8881225.
KEGG	sna:Snas_0049.
PATRIC	35362430. VBIStaNas43420_0046.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000220406.
KO	K02025.
OMA	NEAFFEN.
Enzyme and pathway databases
BioCyc	SNAS446470:GHHC-52-MONOMER.
Family and domain databases
InterPro	IPR000515. BPD_transp. [Graphical view]
Pfam	PF00528. BPD_transp_1. 1 hit. [Graphical view]
PROSITE	PS50928. ABC_TM1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D3QC37_STANL

Accession

Primary (citable) accession number: D3QC37

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 20, 2010
Last modified:	May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)