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D3Q8B6

- D3Q8B6_STANL

UniProt

D3Q8B6 - D3Q8B6_STANL

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Snas_2814

Organism
Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSNAS446470:GHHC-2839-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Snas_2814Imported
OrganismiStackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21)Imported
Taxonomic identifieri446470 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesGlycomycineaeGlycomycetaceaeStackebrandtia
ProteomesiUP000000844: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiVEVKYGQ.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3Q8B6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLPTPGTLPE GPGWGFEFKW DGMRTLIATA DGRARMIARG GGDYASAFPD
60 70 80 90 100
LADIADQLPE GVIDAEIIAL DASARPSFSR VAKRFSNRHP PPDLVRSVPV
110 120 130 140 150
NLMIFDLLRL GDAEVVGQPY WRRREVLDAL ELVGERWLVP PWHDDGAGTL
160 170 180 190 200
AAALDAGLEG VVAKRLDSRY VAGRSRDWVK VKAVDTGDVV VGGWRTAIRS
210 220 230 240 250
LLVGTPNAAG TLTYRGRVGS GLTDAELGRF RAELAPSDAC PFDPPPPGDH
260 270 280 290 300
ARDAIWTAPV AVVEVAFSHL TRSGLMRHPR YVRARPDKTA ADIDPAAMDP
310 320 330 340 350
GASDSGPIDP RAIDPGASDS STIAPAAIDR SSTDAIASDP DAIGSGLIEP

DGDETGES
Length:358
Mass (Da):37,936
Last modified:April 20, 2010 - v1
Checksum:i77E5A3A3F7237275
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001778 Genomic DNA. Translation: ADD42490.1.
RefSeqiYP_003511583.1. NC_013947.1.

Genome annotation databases

EnsemblBacteriaiADD42490; ADD42490; Snas_2814.
GeneIDi8884012.
KEGGisna:Snas_2814.
PATRICi35367925. VBIStaNas43420_2774.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001778 Genomic DNA. Translation: ADD42490.1 .
RefSeqi YP_003511583.1. NC_013947.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADD42490 ; ADD42490 ; Snas_2814 .
GeneIDi 8884012.
KEGGi sna:Snas_2814.
PATRICi 35367925. VBIStaNas43420_2774.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi VEVKYGQ.

Enzyme and pathway databases

BioCyci SNAS446470:GHHC-2839-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21Imported.

Entry informationi

Entry nameiD3Q8B6_STANL
AccessioniPrimary (citable) accession number: D3Q8B6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: October 29, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3