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D3Q8B6

- D3Q8B6_STANL

UniProt

D3Q8B6 - D3Q8B6_STANL

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Snas_2814

Organism
Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 27 (01 Oct 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSNAS446470:GHHC-2839-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Snas_2814Imported
    OrganismiStackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21)Imported
    Taxonomic identifieri446470 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesGlycomycineaeGlycomycetaceaeStackebrandtia
    ProteomesiUP000000844: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiVEVKYGQ.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3Q8B6-1 [UniParc]FASTAAdd to Basket

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    MLPTPGTLPE GPGWGFEFKW DGMRTLIATA DGRARMIARG GGDYASAFPD    50
    LADIADQLPE GVIDAEIIAL DASARPSFSR VAKRFSNRHP PPDLVRSVPV 100
    NLMIFDLLRL GDAEVVGQPY WRRREVLDAL ELVGERWLVP PWHDDGAGTL 150
    AAALDAGLEG VVAKRLDSRY VAGRSRDWVK VKAVDTGDVV VGGWRTAIRS 200
    LLVGTPNAAG TLTYRGRVGS GLTDAELGRF RAELAPSDAC PFDPPPPGDH 250
    ARDAIWTAPV AVVEVAFSHL TRSGLMRHPR YVRARPDKTA ADIDPAAMDP 300
    GASDSGPIDP RAIDPGASDS STIAPAAIDR SSTDAIASDP DAIGSGLIEP 350
    DGDETGES 358
    Length:358
    Mass (Da):37,936
    Last modified:April 20, 2010 - v1
    Checksum:i77E5A3A3F7237275
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001778 Genomic DNA. Translation: ADD42490.1.
    RefSeqiWP_013018061.1. NC_013947.1.
    YP_003511583.1. NC_013947.1.

    Genome annotation databases

    EnsemblBacteriaiADD42490; ADD42490; Snas_2814.
    GeneIDi8884012.
    KEGGisna:Snas_2814.
    PATRICi35367925. VBIStaNas43420_2774.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001778 Genomic DNA. Translation: ADD42490.1 .
    RefSeqi WP_013018061.1. NC_013947.1.
    YP_003511583.1. NC_013947.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADD42490 ; ADD42490 ; Snas_2814 .
    GeneIDi 8884012.
    KEGGi sna:Snas_2814.
    PATRICi 35367925. VBIStaNas43420_2774.

    Phylogenomic databases

    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi VEVKYGQ.

    Enzyme and pathway databases

    BioCyci SNAS446470:GHHC-2839-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21Imported.

    Entry informationi

    Entry nameiD3Q8B6_STANL
    AccessioniPrimary (citable) accession number: D3Q8B6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3