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Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Snas_2802

Organism
Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSNAS446470:GHHC-2827-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:Snas_2802Imported
OrganismiStackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21)Imported
Taxonomic identifieri446470 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesGlycomycineaeGlycomycetaceaeStackebrandtia
ProteomesiUP000000844: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000244654.
KOiK01971.
OMAiCVYSLRA.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

D3Q8A4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAREHRTITV DGYDIEVTNP EKVMYPDSRF TKQDVVDYYL KVASVLLPHI
60 70 80 90 100
RNRPLTRIRF PDGTGGESFF EKNAQKYTPS WIRTETVATP GSTKGRASVD
110 120 130 140 150
YIVAEKPATL AWLANQAALE LHVPQWRFDG HEASDRPDRL VADLDPGKGA
160 170 180 190 200
GLRECVEVAQ LLRERFEADG LTVYVKASGK SGVHLCCPIA GSQGDDVVSG
210 220 230 240 250
YAKAVANDLA AEKPKLVTAK MAKAEREGRV FIDWSQNNAA KTTVAPYSLR
260 270 280 290 300
NRAEATVSAP LTWEELDSDK LTPPGPDEVL ERVAEQGDLW ADVLKKGPKV

PG
Length:302
Mass (Da):33,201
Last modified:April 20, 2010 - v1
Checksum:i2FA1EF2DE6FE2EEE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001778 Genomic DNA. Translation: ADD42478.1.
RefSeqiYP_003511571.1. NC_013947.1.

Genome annotation databases

EnsemblBacteriaiADD42478; ADD42478; Snas_2802.
GeneIDi8884000.
KEGGisna:Snas_2802.
PATRICi35367901. VBIStaNas43420_2762.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001778 Genomic DNA. Translation: ADD42478.1.
RefSeqiYP_003511571.1. NC_013947.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADD42478; ADD42478; Snas_2802.
GeneIDi8884000.
KEGGisna:Snas_2802.
PATRICi35367901. VBIStaNas43420_2762.

Phylogenomic databases

HOGENOMiHOG000244654.
KOiK01971.
OMAiCVYSLRA.

Enzyme and pathway databases

BioCyciSNAS446470:GHHC-2827-MONOMER.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21Imported.

Entry informationi

Entry nameiD3Q8A4_STANL
AccessioniPrimary (citable) accession number: D3Q8A4
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: February 4, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.