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Protein
Submitted name:

Glycoside hydrolase family 16

Gene

Snas_2626

Organism
Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciSNAS446470:GHHC-2648-MONOMER.

Protein family/group databases

CAZyiGH16. Glycoside Hydrolase Family 16.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycoside hydrolase family 16Imported
Gene namesi
Ordered Locus Names:Snas_2626Imported
OrganismiStackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21)Imported
Taxonomic identifieri446470 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaGlycomycetalesGlycomycetaceaeStackebrandtia
Proteomesi
  • UP000000844 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2929Sequence analysisAdd
BLAST
Chaini30 – 283254Sequence analysisPRO_5003048692Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi446470.Snas_2626.

Structurei

3D structure databases

ProteinModelPortaliD3Q6C9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini26 – 283258GH16 (glycosyl hydrolase family 16)InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105FBU. Bacteria.
COG2273. LUCA.
HOGENOMiHOG000019479.
OMAiNHRTPIR.
OrthoDBiPOG091H03M1.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR000757. GH16.
[Graphical view]
PfamiPF00722. Glyco_hydro_16. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
PROSITEiPS51762. GH16_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3Q6C9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRLTRGVLA GVIAAAAAAS LAVTATASAE SPSEDREPKL AWSDEFEGAA
60 70 80 90 100
GTAPDASKWT HEVNGDGGGN GELQYYTDST DNAALDGEGN LVITARKENP
110 120 130 140 150
ADYQCHYGRC EYTSARLNTA KTFTQKYGHF EARIKVPRGT GMWPAFWMLG
160 170 180 190 200
SNFGSTPWPD CGEIDILENI GSEPSTVHGS LHGPGYSGGN PITGSFSLPD
210 220 230 240 250
GQAFADDFHT FAVDWTPEYI AWSVDGKEYQ RKTPADAGGN AWPFDQPFFL
260 270 280
ILNVAVGGAW PGPPGDDTQF PQSMVVDYVR VEA
Length:283
Mass (Da):30,337
Last modified:April 20, 2010 - v1
Checksum:iCA58538C6166BEEC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001778 Genomic DNA. Translation: ADD42304.1.
RefSeqiWP_013017875.1. NC_013947.1.

Genome annotation databases

EnsemblBacteriaiADD42304; ADD42304; Snas_2626.
KEGGisna:Snas_2626.
PATRICi35367549. VBIStaNas43420_2589.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001778 Genomic DNA. Translation: ADD42304.1.
RefSeqiWP_013017875.1. NC_013947.1.

3D structure databases

ProteinModelPortaliD3Q6C9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi446470.Snas_2626.

Protein family/group databases

CAZyiGH16. Glycoside Hydrolase Family 16.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADD42304; ADD42304; Snas_2626.
KEGGisna:Snas_2626.
PATRICi35367549. VBIStaNas43420_2589.

Phylogenomic databases

eggNOGiENOG4105FBU. Bacteria.
COG2273. LUCA.
HOGENOMiHOG000019479.
OMAiNHRTPIR.
OrthoDBiPOG091H03M1.

Enzyme and pathway databases

BioCyciSNAS446470:GHHC-2648-MONOMER.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR000757. GH16.
[Graphical view]
PfamiPF00722. Glyco_hydro_16. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
PROSITEiPS51762. GH16_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiD3Q6C9_STANL
AccessioniPrimary (citable) accession number: D3Q6C9
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 7, 2016
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.