D3Q5X4 (D3Q5X4_STANL) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 28.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: Alanine racemase EMBL ADD40273.1 EC=5.1.1.1 EMBL ADD40273.1 | ||
| Gene names |
| ||
| Organism | Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) [Complete proteome] [HAMAP] | ||
| Taxonomic identifier | 446470 [NCBI] | ||
| Taxonomic lineage | Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Glycomycineae › Glycomycetaceae › Stackebrandtia › ![]() |
Protein attributes
| Sequence length | 366 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Cofactor | Pyridoxal phosphate By similarity. SAAS SAAS011079 |
| Sequence similarities | Belongs to the alanine racemase family. RuleBase RU004188 |
Ontologies
| Keywords | |
|---|---|
| Ligand | Pyridoxal phosphate SAAS SAAS011079 |
| Molecular function | Isomerase SAAS SAAS011079 EMBL ADD40273.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | alanine metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular_function | alanine racemase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21)." Munk C., Lapidus A., Copeland A., Jando M., Mayilraj S., Glavina Del Rio T., Nolan M., Chen F., Lucas S., Tice H., Cheng J.F., Han C., Detter J.C., Bruce D., Goodwin L., Chain P., Pitluck S., Goker M. Klenk H.P.Stand. Genomic Sci. 1:292-299(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001778 Genomic DNA. Translation: ADD40273.1. |
| RefSeq | YP_003509366.1. NC_013947.1. |
3D structure databases | |
| ProteinModelPortal | D3Q5X4. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ADD40273; ADD40273; Snas_0559. |
| GeneID | 8881742. |
| KEGG | sna:Snas_0559. |
| PATRIC | 35363442. VBIStaNas43420_0545. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HOG000031444. |
| KO | K01775. |
| OMA | PRIPRRY. |
Enzyme and pathway databases | |
| BioCyc | SNAS446470:GHHC-569-MONOMER. |
Family and domain databases | |
| Gene3D | 2.40.37.10. 1 hit. |
| HAMAP | MF_01201. Ala_racemase. |
| InterPro | IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view] |
| Pfam | PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view] |
| PRINTS | PR00992. ALARACEMASE. |
| SMART | SM01005. Ala_racemase_C. 1 hit. [Graphical view] |
| SUPFAM | SSF50621. Racem_decarbox_C. 1 hit. |
| TIGRFAMs | TIGR00492. alr. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | D3Q5X4_STANL | ||||||||
| Accession | Primary (citable) accession number: D3Q5X4 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
