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D3PS46 (D3PS46_MEIRD) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit EMBL ADD28279.1
EC=1.2.4.4 EMBL ADD28279.1
Gene names
Ordered Locus Names:Mrub_1517 EMBL ADD28279.1
ORF Names:K649_14975 EMBL AGK06281.1
OrganismMeiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) (Thermus ruber) [Complete proteome] [HAMAP] EMBL ADD28279.1
Taxonomic identifier504728 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeMeiothermus

Protein attributes

Sequence length344 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D3PS46 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: 3296FE3B54086031

FASTA34438,284
        10         20         30         40         50         60 
MDTIQYLDDQ GRPLRDLPLS PEELLQGYRA LRRARHFDER VLVLQRQGRL GVYPPFRGQE 

        70         80         90        100        110        120 
AAQVGVALCL RPDYDWLLPS YRESAAALTF GMPISKLILS WRADPAGWGA PPNVNMVQFY 

       130        140        150        160        170        180 
IPIATQIPQA AGVAHAQRLM GKDAVVAVFI GDGGTSEGDF HEGLNFAAVF EAPLVVVVQN 

       190        200        210        220        230        240 
NGWAISVPTY KQTKVQRIAQ KAQGYGIPGV TVDGNDLVAV WSVAREAVNR ARAGGGPTLI 

       250        260        270        280        290        300 
EALTYRVAPH TSSDDPSRYR SEEETERWLK RDPILRMKNC LLHLGLWSEA QEEALTEALE 

       310        320        330        340 
AEFLAAVEEA DRAPEPKPWE IVEQVYQKMQ PDQQAAWKYL RGEA 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Meiothermus ruber type strain (21)."
Tindall B.J., Sikorski J., Lucas S., Goltsman E., Copeland A., Glavina Del Rio T., Nolan M., Tice H., Cheng J.F., Han C., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Ovchinnikova G., Pati A., Fahnrich R., Goodwin L. expand/collapse author list , Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Rohde M., Goker M., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Lapidus A.
Stand. Genomic Sci. 3:26-36(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35948 / DSM 1279 / VKM B-1258 / 21.
[2]"Non-Hybrid, Finished Microbial Genome Assemblies from Long-Read SMRT Sequencing Data."
Klammer A., Drake J., Heiner C., Clum A., Copeland A., Huddleston J., Eichler E., Turner S.W.
Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 1279 EMBL AGK06281.1.
[3]Chin J., Alexander D.H., Marks P., Korlach J., Clum A., Copeland A.
Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 1279 EMBL AGK06281.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001743 Genomic DNA. Translation: ADD28279.1.
CP005385 Genomic DNA. Translation: AGK06281.1.
RefSeqYP_003507299.1. NC_013946.1.
YP_007881778.1. NC_021081.1.

3D structure databases

ProteinModelPortalD3PS46.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADD28279; ADD28279; Mrub_1517.
AGK06281; AGK06281; K649_14975.
GeneID15337591.
8879618.
KEGGmrb:Mrub_1517.
mre:K649_14975.
PATRIC35359210. VBIMeiRub128672_1529.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000281335.
KOK00161.
OMAWAISEPI.

Enzyme and pathway databases

BioCycMRUB504728:GI6U-1553-MONOMER.

Family and domain databases

Gene3D3.40.50.970. 1 hit.
InterProIPR001017. DH_E1.
IPR017596. Pyrv_DH_E1_asu_subgrp-x.
IPR029061. THDP-binding.
[Graphical view]
PfamPF00676. E1_dh. 1 hit.
[Graphical view]
SUPFAMSSF52518. SSF52518. 1 hit.
TIGRFAMsTIGR03181. PDH_E1_alph_x. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD3PS46_MEIRD
AccessionPrimary (citable) accession number: D3PS46
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: June 11, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)