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D3PQM6

- D3PQM6_MEIRD

UniProt

D3PQM6 - D3PQM6_MEIRD

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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) (Thermus ruber)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Magnesium.UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei147 – 1471UniRule annotation
Active sitei557 – 5571UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciMRUB504728:GI6U-1016-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Mrub_0994Imported
ORF Names:K649_04610Imported
OrganismiMeiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) (Thermus ruber)Imported
Taxonomic identifieri504728 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeMeiothermus
ProteomesiUP000006655: Chromosome, UP000013026: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000238647.
KOiK01595.
OMAiELSTISC.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3PQM6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNEERLFEQL KREVDVLGRA LGKAIRTLSG PRIFELEEQV RELTKSLRQG
60 70 80 90 100
YSLEARQQLL EIVRGLSLSE AENMVRAFST YFHLVNLAEE RHRVRVNRER
110 120 130 140 150
EKNSTPGAPR GESFLALVGA LKQQGLSYDQ TVDLLSRLRL HLTFTAHPTE
160 170 180 190 200
TRRRTQRHHI NEIEKLLDSL YLDDLTAAAD SSVLDARVAL LWGTSELRKS
210 220 230 240 250
RPSVEDEVKG GLFYITYTLW KAVPRLVDGL ERAVEAHYGR RPNLSPPLVF
260 270 280 290 300
RSWIGGDRDG NPNVLPEVTG WAQAYARETA LRRFVEDVDS LIRDLSLSDE
310 320 330 340 350
RVTITHELRL ALEDHAKRLA LPERFQGEPY RQFGMGLRYK LRALLGEQPG
360 370 380 390 400
PGYNNTAEFV SDLGKAERSL EQLGLGAIAR ACLKPIRLNA EAFGLDLVSL
410 420 430 440 450
DLREESRALT EAAAELLKIG GVHEQYAALP PQQREALLTR ELATARPLAP
460 470 480 490 500
VGYRPQSKSL QTALEALRQW KARGAHVVSM THYPSDLLEV MLLAREVGLY
510 520 530 540 550
RPGRALPFDV VPLFETLGDL QNAPEVVARL LDNPVFRAHV QGRGGLEVMI
560 570 580 590 600
GYSDSNKDAG FLAANWALYQ AQEAITKVAR ERGVPVYYFH GRGTSTARGG
610 620 630 640 650
GTAGRAIASL PPGTVGSRMR LTEQGEALAD RYAHPELAYR NLEQMLYHMA
660 670 680 690 700
LASARDLYGQ AEPPKPEWLE AMERAAERST QVYRELLLRP GFFEFYEQLT
710 720 730 740 750
PIREIGALNI ASRPVYRSGR VREIKDLRAI PWVMSWTQVR LLLPGWYGLA
760 770 780 790 800
EGLQEIPLAL RQEMFQQWPF FATTLDSAAI ALAKADLGIA REYLRLVKPE
810 820 830 840 850
LAERFFPDIA RSFEQTKTIL EETFQSTLLF KHPVLARQTE LRNPYVDPIS
860 870 880 890
LVQVELLERY RRTPPEAPER TGLERALMLS LLGIAAGLRN AG
Length:892
Mass (Da):100,585
Last modified:April 20, 2010 - v1
Checksum:iF376E58DF9071E7F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001743 Genomic DNA. Translation: ADD27759.1.
CP005385 Genomic DNA. Translation: AGK04224.1.
RefSeqiYP_003506779.1. NC_013946.1.
YP_007879721.1. NC_021081.1.

Genome annotation databases

EnsemblBacteriaiADD27759; ADD27759; Mrub_0994.
AGK04224; AGK04224; K649_04610.
GeneIDi15335534.
8879082.
KEGGimrb:Mrub_0994.
mre:K649_04610.
PATRICi35358124. VBIMeiRub128672_0999.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001743 Genomic DNA. Translation: ADD27759.1 .
CP005385 Genomic DNA. Translation: AGK04224.1 .
RefSeqi YP_003506779.1. NC_013946.1.
YP_007879721.1. NC_021081.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADD27759 ; ADD27759 ; Mrub_0994 .
AGK04224 ; AGK04224 ; K649_04610 .
GeneIDi 15335534.
8879082.
KEGGi mrb:Mrub_0994.
mre:K649_04610.
PATRICi 35358124. VBIMeiRub128672_0999.

Phylogenomic databases

HOGENOMi HOG000238647.
KOi K01595.
OMAi ELSTISC.

Enzyme and pathway databases

BioCyci MRUB504728:GI6U-1016-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35948 / DSM 1279 / VKM B-1258 / 21Imported.
  2. "Non-Hybrid, Finished Microbial Genome Assemblies from Long-Read SMRT Sequencing Data."
    Klammer A., Drake J., Heiner C., Clum A., Copeland A., Huddleston J., Eichler E., Turner S.W.
    Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 1279Imported.
  3. Chin J., Alexander D.H., Marks P., Korlach J., Clum A., Copeland A.
    Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 1279Imported.

Entry informationi

Entry nameiD3PQM6_MEIRD
AccessioniPrimary (citable) accession number: D3PQM6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: October 29, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3