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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Mrub_0902

Organism
Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) (Thermus ruber)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciMRUB504728:GI6U-920-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Mrub_0902Imported
ORF Names:K649_04150Imported
OrganismiMeiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) (Thermus ruber)Imported
Taxonomic identifieri504728 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeMeiothermus
ProteomesiUP000006655: Chromosome, UP000013026: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD3PQ41.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000230274.
KOiK01601.
OMAiPIFAHPA.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

D3PQ41-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MYELEATYRI QSTPEKIEAR AQALAIEQSI EMPPTAVRQP ELLQKVLAQV
60 70 80 90 100
DSIQEAGAGY FRVVLRFAEQ TTAFETTGLL NVLFGNCALQ EDVELLDLKL
110 120 130 140 150
PPSLLSLFAG PRFGIAGLRQ LAQVEGRPLT CTALKPQGLS PTQLAELAYT
160 170 180 190 200
FALGGIDIVK DDHGLTNQPT APFAERVPVI QEAIARANAE TGGHTLYAPM
210 220 230 240 250
LTGGPKTLHR HLRIARQAGV KVILTAPMLL GLATFQELVE DLGLAVLAHP
260 270 280 290 300
AFAGLRISPP LMFGKLFRLL GADAVIFPNH GGRFAYSPQT CLALAQAARA
310 320 330 340 350
PWGHIRPALP VPAGGMTVER VEEMLGLYGL ETMLLIGGDL LAAKDNLLER
360
TRQFVQKVAV STGKV
Length:365
Mass (Da):39,307
Last modified:April 20, 2010 - v1
Checksum:i9CD688C20D454FAC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001743 Genomic DNA. Translation: ADD27667.1.
CP005385 Genomic DNA. Translation: AGK04132.1.
RefSeqiYP_003506687.1. NC_013946.1.
YP_007879629.1. NC_021081.1.

Genome annotation databases

EnsemblBacteriaiADD27667; ADD27667; Mrub_0902.
AGK04132; AGK04132; K649_04150.
GeneIDi15335442.
8878986.
KEGGimrb:Mrub_0902.
mre:K649_04150.
PATRICi35357930. VBIMeiRub128672_0906.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001743 Genomic DNA. Translation: ADD27667.1.
CP005385 Genomic DNA. Translation: AGK04132.1.
RefSeqiYP_003506687.1. NC_013946.1.
YP_007879629.1. NC_021081.1.

3D structure databases

ProteinModelPortaliD3PQ41.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADD27667; ADD27667; Mrub_0902.
AGK04132; AGK04132; K649_04150.
GeneIDi15335442.
8878986.
KEGGimrb:Mrub_0902.
mre:K649_04150.
PATRICi35357930. VBIMeiRub128672_0906.

Phylogenomic databases

HOGENOMiHOG000230274.
KOiK01601.
OMAiPIFAHPA.

Enzyme and pathway databases

BioCyciMRUB504728:GI6U-920-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35948 / DSM 1279 / VKM B-1258 / 21Imported.
  2. "Non-Hybrid, Finished Microbial Genome Assemblies from Long-Read SMRT Sequencing Data."
    Klammer A., Drake J., Heiner C., Clum A., Copeland A., Huddleston J., Eichler E., Turner S.W.
    Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 1279Imported.
  3. Chin J., Alexander D.H., Marks P., Korlach J., Clum A., Copeland A.
    Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 1279Imported.

Entry informationi

Entry nameiD3PQ41_MEIRD
AccessioniPrimary (citable) accession number: D3PQ41
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: January 7, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.