D3PPZ0 (D3PPZ0_MEIRD) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 22.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HAMAP-Rule MF_01014 RuleBase RU003658 EC=5.3.1.16 HAMAP-Rule MF_01014 RuleBase RU003658 Alternative name(s): Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HAMAP-Rule MF_01014 | ||||
| Gene names |
| ||||
| Organism | Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) (Thermus ruber) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 504728 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Meiothermus › ![]() |
Protein attributes
| Sequence length | 234 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide = 5-((5-phospho-1-deoxyribulos-1-ylamino)methylideneamino)-1-(5-phosphoribosyl)imidazole-4-carboxamide. HAMAP-Rule MF_01014 RuleBase RU003658 SAAS SAAS006063 |
| Pathway | Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 4/9. HAMAP-Rule MF_01014 RuleBase RU003658 SAAS SAAS006063 |
| Subcellular location | Cytoplasm By similarity HAMAP-Rule MF_01014 RuleBase RU003658 SAAS SAAS006063. |
| Sequence similarities | Belongs to the HisA/HisF family. HAMAP-Rule MF_01014 RuleBase RU003657 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Histidine biosynthesis HAMAP-Rule MF_01014 RuleBase RU003657 SAAS SAAS006063 |
| Cellular component | Cytoplasm HAMAP-Rule MF_01014 RuleBase RU003658 SAAS SAAS006063 |
| Molecular function | Isomerase HAMAP-Rule MF_01014 SAAS SAAS006063 RuleBase RU003658 EMBL ADD27616.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | histidine biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Cellular_component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity Inferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Sites | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Active site | 8 | 1 | Proton acceptor By similarity HAMAP-Rule MF_01014 | ||||||
| Active site | 129 | 1 | Proton donor By similarity HAMAP-Rule MF_01014 | ||||||
Sequences
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References
| [1] | "Complete genome sequence of Meiothermus ruber type strain (21)." Tindall B., Sikorski J., Lucas S., Goltsman E., Copeland A., Glavina Del Rio T., Nolan M., Tice H., Cheng J., Han C., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Ovchinnikova G., Pati A., Fahnrich R., Goodwin L. Lapidus A.Stand. Genomic Sci. 3:26-36(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35948 / DSM 1279 / VKM B-1258 / 21. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001743 Genomic DNA. Translation: ADD27616.1. |
| RefSeq | YP_003506636.1. NC_013946.1. |
3D structure databases | |
| ProteinModelPortal | D3PPZ0. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ADD27616; ADD27616; Mrub_0851. |
| GeneID | 8878935. |
| KEGG | mrb:Mrub_0851. |
| PATRIC | 35357826. VBIMeiRub128672_0854. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HOG000224614. |
| KO | K01814. |
| OMA | DGHCVRL. |
Enzyme and pathway databases | |
| BioCyc | MRUB504728:GI6U-869-MONOMER. |
| UniPathway | UPA00031; UER00009. |
Family and domain databases | |
| Gene3D | 3.20.20.70. 1 hit. |
| HAMAP | MF_01014. HisA. |
| InterPro | IPR013785. Aldolase_TIM. IPR006062. His_biosynth. IPR006063. HisA. IPR023016. Isoase_HisA. IPR011060. RibuloseP-bd_barrel. [Graphical view] |
| Pfam | PF00977. His_biosynth. 1 hit. [Graphical view] |
| SUPFAM | SSF51366. RibP_bind_barrel. 1 hit. |
| TIGRFAMs | TIGR00007. TIGR00007. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | D3PPZ0_MEIRD | ||||||||
| Accession | Primary (citable) accession number: D3PPZ0 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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