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D3PN44

- D3PN44_MEIRD

UniProt

D3PN44 - D3PN44_MEIRD

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Protein

Elongation factor Tu

Gene

tuf

Organism
Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) (Thermus ruber)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTPUniRule annotation
Nucleotide bindingi82 – 865GTPUniRule annotation
Nucleotide bindingi137 – 1404GTPUniRule annotation

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-HAMAP
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotation

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciMRUB504728:GI6U-2668-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufUniRule annotation
Ordered Locus Names:Mrub_2621Imported
ORF Names:K649_09430Imported
OrganismiMeiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) (Thermus ruber)Imported
Taxonomic identifieri504728 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeMeiothermus
ProteomesiUP000013026: Chromosome, UP000006655: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000229290.
KOiK02358.
OMAiERKPHIN.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3PN44-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAKGVFERTK PHVNVGTIGH VDHGKTTLTA AITFVAAAAN PNVEVQAYDQ
60 70 80 90 100
IDKAPEEKAR GITINTAHVE YETEKRHYSH VDCPGHADYV KNMITGAAQM
110 120 130 140 150
DGAILVVSGT DGPMPQTREH ILLSRQVGVP YIIVFLNKID MVDDPELLDL
160 170 180 190 200
VEMEIRDLLN QYEFPGDDTP IIRGSGLKAL EHMMAHPKTQ RGENEWVDKI
210 220 230 240 250
WELLDAIDSY IPTPQRDVDK PFLMPVEDVF TITGRGTVAT GRIERGKIKT
260 270 280 290 300
GDEVEIVGLR ETQKTVVTGV EMHRKTLSEG IAGDNVGLLL RGVSREDVER
310 320 330 340 350
GQVLAKPGSV TPHTKFEASV YILKKEEGGR HTGFFTNYRP QFYFRTTDVT
360 370 380 390 400
GVVELPKGVE MVMPGDNVTF TVELIKPIAM EEGLRFAIRE GGRTVGAGVV

AKIIE
Length:405
Mass (Da):44,722
Last modified:April 20, 2010 - v1
Checksum:iAED239172CFC92D0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001743 Genomic DNA. Translation: ADD29371.1.
CP005385 Genomic DNA. Translation: AGK05179.1.
RefSeqiYP_003508391.1. NC_013946.1.
YP_007880676.1. NC_021081.1.

Genome annotation databases

EnsemblBacteriaiADD29371; ADD29371; Mrub_2621.
AGK05179; AGK05179; K649_09430.
GeneIDi15336489.
8880733.
KEGGimrb:Mrub_2621.
mre:K649_09430.
PATRICi35361443. VBIMeiRub128672_2634.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001743 Genomic DNA. Translation: ADD29371.1 .
CP005385 Genomic DNA. Translation: AGK05179.1 .
RefSeqi YP_003508391.1. NC_013946.1.
YP_007880676.1. NC_021081.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADD29371 ; ADD29371 ; Mrub_2621 .
AGK05179 ; AGK05179 ; K649_09430 .
GeneIDi 15336489.
8880733.
KEGGi mrb:Mrub_2621.
mre:K649_09430.
PATRICi 35361443. VBIMeiRub128672_2634.

Phylogenomic databases

HOGENOMi HOG000229290.
KOi K02358.
OMAi ERKPHIN.

Enzyme and pathway databases

BioCyci MRUB504728:GI6U-2668-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35948 / DSM 1279 / VKM B-1258 / 21Imported.
  2. "Non-Hybrid, Finished Microbial Genome Assemblies from Long-Read SMRT Sequencing Data."
    Klammer A., Drake J., Heiner C., Clum A., Copeland A., Huddleston J., Eichler E., Turner S.W.
    Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 1279Imported.
  3. Chin J., Alexander D.H., Marks P., Korlach J., Clum A., Copeland A.
    Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 1279Imported.

Entry informationi

Entry nameiD3PN44_MEIRD
AccessioniPrimary (citable) accession number: D3PN44
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 26, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3