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D3PN44

- D3PN44_MEIRD

UniProt

D3PN44 - D3PN44_MEIRD

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Protein
Elongation factor Tu
Gene
tuf, Mrub_2621, K649_09430
Organism
Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) (Thermus ruber)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTP By similarityUniRule annotation
Nucleotide bindingi82 – 865GTP By similarityUniRule annotation
Nucleotide bindingi137 – 1404GTP By similarityUniRule annotation

GO - Molecular functioni

  1. GTP binding Source: UniProtKB-HAMAP
  2. GTPase activity Source: InterPro
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Molecular functioni

    Elongation factorUniRule annotationImported

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    GTP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciMRUB504728:GI6U-2668-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Elongation factor TuUniRule annotation
    Short name:
    EF-TuUniRule annotation
    Gene namesi
    Name:tufUniRule annotation
    Ordered Locus Names:Mrub_2621Imported
    ORF Names:K649_09430Imported
    OrganismiMeiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) (Thermus ruber)Imported
    Taxonomic identifieri504728 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeMeiothermus
    ProteomesiUP000006655: Chromosome, UP000013026: Chromosome

    Subcellular locationi

    Cytoplasm By similarity UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell
    Complete GO annotation...

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Monomer By similarity.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    HOGENOMiHOG000229290.
    KOiK02358.
    OMAiERKPHIN.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    HAMAPiMF_00118_B. EF_Tu_B.
    InterProiIPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view]
    PfamiPF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view]
    PRINTSiPR00315. ELONGATNFCT.
    SUPFAMiSSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEiPS00301. EFACTOR_GTP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3PN44-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAKGVFERTK PHVNVGTIGH VDHGKTTLTA AITFVAAAAN PNVEVQAYDQ    50
    IDKAPEEKAR GITINTAHVE YETEKRHYSH VDCPGHADYV KNMITGAAQM 100
    DGAILVVSGT DGPMPQTREH ILLSRQVGVP YIIVFLNKID MVDDPELLDL 150
    VEMEIRDLLN QYEFPGDDTP IIRGSGLKAL EHMMAHPKTQ RGENEWVDKI 200
    WELLDAIDSY IPTPQRDVDK PFLMPVEDVF TITGRGTVAT GRIERGKIKT 250
    GDEVEIVGLR ETQKTVVTGV EMHRKTLSEG IAGDNVGLLL RGVSREDVER 300
    GQVLAKPGSV TPHTKFEASV YILKKEEGGR HTGFFTNYRP QFYFRTTDVT 350
    GVVELPKGVE MVMPGDNVTF TVELIKPIAM EEGLRFAIRE GGRTVGAGVV 400
    AKIIE 405
    Length:405
    Mass (Da):44,722
    Last modified:April 20, 2010 - v1
    Checksum:iAED239172CFC92D0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001743 Genomic DNA. Translation: ADD29371.1.
    CP005385 Genomic DNA. Translation: AGK05179.1.
    RefSeqiWP_013014869.1. NC_021081.1.
    YP_003508391.1. NC_013946.1.
    YP_007880676.1. NC_021081.1.

    Genome annotation databases

    EnsemblBacteriaiADD29371; ADD29371; Mrub_2621.
    AGK05179; AGK05179; K649_09430.
    GeneIDi15336489.
    8880733.
    KEGGimrb:Mrub_2621.
    mre:K649_09430.
    PATRICi35361443. VBIMeiRub128672_2634.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001743 Genomic DNA. Translation: ADD29371.1 .
    CP005385 Genomic DNA. Translation: AGK05179.1 .
    RefSeqi WP_013014869.1. NC_021081.1.
    YP_003508391.1. NC_013946.1.
    YP_007880676.1. NC_021081.1.

    3D structure databases

    ModBasei Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADD29371 ; ADD29371 ; Mrub_2621 .
    AGK05179 ; AGK05179 ; K649_09430 .
    GeneIDi 15336489.
    8880733.
    KEGGi mrb:Mrub_2621.
    mre:K649_09430.
    PATRICi 35361443. VBIMeiRub128672_2634.

    Phylogenomic databases

    HOGENOMi HOG000229290.
    KOi K02358.
    OMAi ERKPHIN.

    Enzyme and pathway databases

    BioCyci MRUB504728:GI6U-2668-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    HAMAPi MF_00118_B. EF_Tu_B.
    InterProi IPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view ]
    Pfami PF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view ]
    PRINTSi PR00315. ELONGATNFCT.
    SUPFAMi SSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEi PS00301. EFACTOR_GTP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    « Hide 'large scale' publications
    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 35948 / DSM 1279 / VKM B-1258 / 21.
    2. "Non-Hybrid, Finished Microbial Genome Assemblies from Long-Read SMRT Sequencing Data."
      Klammer A., Drake J., Heiner C., Clum A., Copeland A., Huddleston J., Eichler E., Turner S.W.
      Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DSM 1279Imported.
    3. Chin J., Alexander D.H., Marks P., Korlach J., Clum A., Copeland A.
      Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DSM 1279Imported.

    Entry informationi

    Entry nameiD3PN44_MEIRD
    AccessioniPrimary (citable) accession number: D3PN44
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: September 3, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    External Data

    Dasty 3

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