D3P3U2 (D3P3U2_AZOS1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase EMBL BAI75321.1
EC=2.6.1.19 EMBL BAI75321.1

Gene names

Name:	gabT EMBL BAI75321.1
Ordered Locus Names:	AZL_c00280 EMBL BAI75321.1

Encoded on

Plasmid pAB510c EMBL BAI75321.1

Organism

Azospirillum sp. (strain B510) [Complete proteome] [HAMAP] EMBL BAI75321.1

Taxonomic identifier

137722 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhodospirillales › Rhodospirillaceae › Azospirillum › Azospirillum lipoferum

Protein attributes

Sequence length	429 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL BAI75321.1 Transferase
Technical term	Complete proteome Plasmid EMBL BAI75321.1
Gene Ontology (GO)
Biological_process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3P3U2 [UniParc]. Last modified April 20, 2010. Version 1. Checksum: FFF1FC28328A3CF0	FASTA	429	45,474
	10 20 30 40 50 60 MTTNQSFVAR REAAVSRGIS AGMPVYIDRA ENAEMWDVEG KRFIDFAGGI AVLNTGHRHP 70 80 90 100 110 120 KVMEAVKAQL DRFTHTCAMV TPYDSFVELA EKLNALVPGR EPKKTAFFTT GAEAVENAVK 130 140 150 160 170 180 VARAATGRPG VVAFSGGFHG RTLLTMGLTG KVVPYKVGFG PFPAEIFHVP FPNAYRGISE 190 200 210 220 230 240 AESLKALENL FKSDVDPARV AAIIIEPVQG EGGFNIASPS FLQALRAVCD KHGIVMIVDE 250 260 270 280 290 300 IQTGFARTGK MFAVEHAGIE PDLVTMAKSL AGGFPLSAVT GKAALMDAPI PGGLGGTYAG 310 320 330 340 350 360 SPLATTAALA VINVIEEEKL VERSEKLGEH IAGRFRAMAQ RNSLSVIGDV RNLGAMVAME 370 380 390 400 410 420 LVTDRETKEP AADLTKALVA KAAEKGLVLL SCGTYANVIR ILVPLTASDA LVDEGLDIIE RSLEELVSA

References

[1]

"Complete genomic structure of the cultivated rice endophyte Azospirillum sp. B510." Kaneko T., Minamisawa K., Isawa T., Nakatsukasa H., Mitsui H., Kawaharada Y., Nakamura Y., Watanabe A., Kawashima K., Ono A., Shimizu Y., Takahashi C., Minami C., Fujishiro T., Kohara M., Katoh M., Nakazaki N., Nakayama S. , Yamada M., Tabata S., Sato S. DNA Res. 17:37-50(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: B510 EMBL BAI75321.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP010949 Genomic DNA. Translation: BAI75321.1.
RefSeq	YP_003451865.1. NC_013857.1.
3D structure databases
ProteinModelPortal	D3P3U2.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAI75321; BAI75321; AZL_c00280.
GeneID	8794988.
KEGG	azl:AZL_c00280.
PATRIC	31938946. VBIAzoSp82869_5045.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000020206.
KO	K07250.
Enzyme and pathway databases
BioCyc	ASP137722:GBYD-4771-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00700. GABAtrnsam. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D3P3U2_AZOS1

Accession

Primary (citable) accession number: D3P3U2

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 20, 2010
Last modified:	May 29, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)