D3NRC1 (D3NRC1_AZOS1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase (ATP) EMBL BAI70950.1
EC=6.5.1.1 EMBL BAI70950.1

Gene names

Name:	lig EMBL BAI70950.1
Ordered Locus Names:	AZL_003120 EMBL BAI70950.1

Organism

Azospirillum sp. (strain B510) [Complete proteome] [HAMAP] EMBL BAI70950.1

Taxonomic identifier

137722 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhodospirillales › Rhodospirillaceae › Azospirillum › Azospirillum lipoferum

Protein attributes

Sequence length	533 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL BAI70950.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3NRC1 [UniParc]. Last modified April 20, 2010. Version 1. Checksum: EE761D7E78080D6C	FASTA	533	59,307
	10 20 30 40 50 60 MNRFAALIDA LVFMPSRSGK IRLLVDHFAS APDPERGWAL AALTGALSFR EAKPAAIREL 70 80 90 100 110 120 AAARVDPVLL ALSYDYVGDL AETVALIWPE RPNPANSPPP GPSPGLDEVV EGLRAARRGQ 130 140 150 160 170 180 VMGLVEGWLD TLDPSGRFAL LKLITGALRI GVSARLAKTA LAEWGRAARP EVGVDDVEEV 190 200 210 220 230 240 WHGLTAPYPE LFAWLEGRAE RPATGAGAGF RPMMLSHPLE EEDRAGLDPA AYAAEWKWDG 250 260 270 280 290 300 IRVQLVARGG ERRLYSRTGD DVSGAFPDIV DHMSFDAVLD GELLVARDGV VAPFNDLQQR 310 320 330 340 350 360 LNRKSVTARM LRDGPAWVRL YDILFDGEED LRGLSFVERR ARLERWFETV RPRRMDLSPL 370 380 390 400 410 420 VPFAGWDELA GLREGARENG IEGLMLKRRD SAYLAGRPKG PWFKWKRGAL TLDTVMMYAQ 430 440 450 460 470 480 RGHGKRSSYY SDYTFGVWRG EELVPVGKAY SGFTDAELIE LDRWVRTHTT RRYGPVREVE 490 500 510 520 530 AGLVLEVAFD SVHPSTRHKS GLAMRFPRIH RIRWDKPATE ADRLETLAAL VAG

References

[1]

"Complete genomic structure of the cultivated rice endophyte Azospirillum sp. B510." Kaneko T., Minamisawa K., Isawa T., Nakatsukasa H., Mitsui H., Kawaharada Y., Nakamura Y., Watanabe A., Kawashima K., Ono A., Shimizu Y., Takahashi C., Minami C., Fujishiro T., Kohara M., Katoh M., Nakazaki N., Nakayama S. , Yamada M., Tabata S., Sato S. DNA Res. 17:37-50(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: B510 EMBL BAI70950.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP010946 Genomic DNA. Translation: BAI70950.1.
RefSeq	YP_003447494.1. NC_013854.1.
3D structure databases
ProteinModelPortal	D3NRC1.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAI70950; BAI70950; AZL_003120.
GeneID	8788863.
KEGG	azl:AZL_003120.
PATRIC	31929381. VBIAzoSp82869_0341.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000036007.
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D3NRC1_AZOS1

Accession

Primary (citable) accession number: D3NRC1

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 20, 2010
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)