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D3NRC1

- D3NRC1_AZOS1

UniProt

D3NRC1 - D3NRC1_AZOS1

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Protein
Submitted name:

DNA ligase (ATP)

Gene

lig

Organism
Azospirillum sp. (strain B510)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciASP137722:GBYD-317-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
Gene namesi
Name:ligImported
Ordered Locus Names:AZL_003120Imported
OrganismiAzospirillum sp. (strain B510)Imported
Taxonomic identifieri137722 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeAzospirillum
ProteomesiUP000002040: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD3NRC1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000036007.
KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3NRC1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNRFAALIDA LVFMPSRSGK IRLLVDHFAS APDPERGWAL AALTGALSFR
60 70 80 90 100
EAKPAAIREL AAARVDPVLL ALSYDYVGDL AETVALIWPE RPNPANSPPP
110 120 130 140 150
GPSPGLDEVV EGLRAARRGQ VMGLVEGWLD TLDPSGRFAL LKLITGALRI
160 170 180 190 200
GVSARLAKTA LAEWGRAARP EVGVDDVEEV WHGLTAPYPE LFAWLEGRAE
210 220 230 240 250
RPATGAGAGF RPMMLSHPLE EEDRAGLDPA AYAAEWKWDG IRVQLVARGG
260 270 280 290 300
ERRLYSRTGD DVSGAFPDIV DHMSFDAVLD GELLVARDGV VAPFNDLQQR
310 320 330 340 350
LNRKSVTARM LRDGPAWVRL YDILFDGEED LRGLSFVERR ARLERWFETV
360 370 380 390 400
RPRRMDLSPL VPFAGWDELA GLREGARENG IEGLMLKRRD SAYLAGRPKG
410 420 430 440 450
PWFKWKRGAL TLDTVMMYAQ RGHGKRSSYY SDYTFGVWRG EELVPVGKAY
460 470 480 490 500
SGFTDAELIE LDRWVRTHTT RRYGPVREVE AGLVLEVAFD SVHPSTRHKS
510 520 530
GLAMRFPRIH RIRWDKPATE ADRLETLAAL VAG
Length:533
Mass (Da):59,307
Last modified:April 20, 2010 - v1
Checksum:iEE761D7E78080D6C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010946 Genomic DNA. Translation: BAI70950.1.
RefSeqiWP_012972938.1. NC_013854.1.
YP_003447494.1. NC_013854.1.

Genome annotation databases

EnsemblBacteriaiBAI70950; BAI70950; AZL_003120.
GeneIDi8788863.
KEGGiazl:AZL_003120.
PATRICi31929381. VBIAzoSp82869_0341.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010946 Genomic DNA. Translation: BAI70950.1 .
RefSeqi WP_012972938.1. NC_013854.1.
YP_003447494.1. NC_013854.1.

3D structure databases

ProteinModelPortali D3NRC1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAI70950 ; BAI70950 ; AZL_003120 .
GeneIDi 8788863.
KEGGi azl:AZL_003120.
PATRICi 31929381. VBIAzoSp82869_0341.

Phylogenomic databases

HOGENOMi HOG000036007.
KOi K01971.

Enzyme and pathway databases

BioCyci ASP137722:GBYD-317-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B510Imported.

Entry informationi

Entry nameiD3NRC1_AZOS1
AccessioniPrimary (citable) accession number: D3NRC1
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: October 29, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3