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D3NRC1

- D3NRC1_AZOS1

UniProt

D3NRC1 - D3NRC1_AZOS1

Protein
Submitted name:

DNA ligase (ATP)

Gene

lig

Organism
Azospirillum sp. (strain B510)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciASP137722:GBYD-317-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
    Gene namesi
    Name:ligImported
    Ordered Locus Names:AZL_003120Imported
    OrganismiAzospirillum sp. (strain B510)Imported
    Taxonomic identifieri137722 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeAzospirillum
    ProteomesiUP000002040: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD3NRC1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000036007.
    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3NRC1-1 [UniParc]FASTAAdd to Basket

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    MNRFAALIDA LVFMPSRSGK IRLLVDHFAS APDPERGWAL AALTGALSFR    50
    EAKPAAIREL AAARVDPVLL ALSYDYVGDL AETVALIWPE RPNPANSPPP 100
    GPSPGLDEVV EGLRAARRGQ VMGLVEGWLD TLDPSGRFAL LKLITGALRI 150
    GVSARLAKTA LAEWGRAARP EVGVDDVEEV WHGLTAPYPE LFAWLEGRAE 200
    RPATGAGAGF RPMMLSHPLE EEDRAGLDPA AYAAEWKWDG IRVQLVARGG 250
    ERRLYSRTGD DVSGAFPDIV DHMSFDAVLD GELLVARDGV VAPFNDLQQR 300
    LNRKSVTARM LRDGPAWVRL YDILFDGEED LRGLSFVERR ARLERWFETV 350
    RPRRMDLSPL VPFAGWDELA GLREGARENG IEGLMLKRRD SAYLAGRPKG 400
    PWFKWKRGAL TLDTVMMYAQ RGHGKRSSYY SDYTFGVWRG EELVPVGKAY 450
    SGFTDAELIE LDRWVRTHTT RRYGPVREVE AGLVLEVAFD SVHPSTRHKS 500
    GLAMRFPRIH RIRWDKPATE ADRLETLAAL VAG 533
    Length:533
    Mass (Da):59,307
    Last modified:April 20, 2010 - v1
    Checksum:iEE761D7E78080D6C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP010946 Genomic DNA. Translation: BAI70950.1.
    RefSeqiYP_003447494.1. NC_013854.1.

    Genome annotation databases

    EnsemblBacteriaiBAI70950; BAI70950; AZL_003120.
    GeneIDi8788863.
    KEGGiazl:AZL_003120.
    PATRICi31929381. VBIAzoSp82869_0341.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP010946 Genomic DNA. Translation: BAI70950.1 .
    RefSeqi YP_003447494.1. NC_013854.1.

    3D structure databases

    ProteinModelPortali D3NRC1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAI70950 ; BAI70950 ; AZL_003120 .
    GeneIDi 8788863.
    KEGGi azl:AZL_003120.
    PATRICi 31929381. VBIAzoSp82869_0341.

    Phylogenomic databases

    HOGENOMi HOG000036007.
    KOi K01971.

    Enzyme and pathway databases

    BioCyci ASP137722:GBYD-317-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: B510Imported.

    Entry informationi

    Entry nameiD3NRC1_AZOS1
    AccessioniPrimary (citable) accession number: D3NRC1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3