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D3HFJ8 (D3HFJ8_STRG3) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
GTPase Der HAMAP-Rule MF_00195 RuleBase RU004481
Alternative name(s):
GTP-binding protein EngA HAMAP-Rule MF_00195
Gene names
Name:engA EMBL CBI14312.1
Synonyms:der HAMAP-Rule MF_00195
Ordered Locus Names:GALLO_1821
OrganismStreptococcus gallolyticus (strain UCN34) [Complete proteome] [HAMAP]
Taxonomic identifier637909 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Lactobacillales › Streptococcaceae › Streptococcus ›

Protein attributes

Sequence length436 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

GTPase that plays an essential role in the late steps of ribosome biogenesis By similarity. HAMAP-Rule MF_00195 RuleBase RU004481

Subunit structure

Associates with the 50S ribosomal subunit By similarity. HAMAP-Rule MF_00195

Sequence similarities

Belongs to the Era/MnmE GTP-binding protein family. Der subfamily. HAMAP-Rule MF_00195 RuleBase RU004481

Contains 1 KH-like domain. HAMAP-Rule MF_00195 SAAS SAAS016484

Contains 2 G (guanine nucleotide-binding) domains. HAMAP-Rule MF_00195 SAAS SAAS016484

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Domain6 – 120115G 1 By similarity HAMAP-Rule MF_00195
Domain177 – 295119G 2 By similarity HAMAP-Rule MF_00195
Nucleotide binding10 – 178GTP 1 By similarity HAMAP-Rule MF_00195
Nucleotide binding57 – 615GTP 1 By similarity HAMAP-Rule MF_00195
Nucleotide binding119 – 1224GTP 1 By similarity HAMAP-Rule MF_00195
Nucleotide binding181 – 1888GTP 2 By similarity HAMAP-Rule MF_00195
Nucleotide binding229 – 2335GTP 2 By similarity HAMAP-Rule MF_00195
Nucleotide binding294 – 2974GTP 2 By similarity HAMAP-Rule MF_00195

Sequences

Sequence LengthMass (Da)Tools
D3HFJ8 [UniParc].

Last modified March 23, 2010. Version 1.
Checksum: 6B994191F94CE183

FASTA43648,765
        10         20         30         40         50         60 
MALPTVAIVG RPNVGKSTLF NRIAGERISI VEDVEGVTRD RIYTTGEWLN RKFSLIDTGG 

        70         80         90        100        110        120 
IDDVDAPFME QIKHQADIAM TEADVIVFVV SGKEGVTDAD EYVSKILYRT NKPVILVVNK 

       130        140        150        160        170        180 
VDNPEMRSDI YDFYSLGLGD PYPVSSVHGI GTGDVLDAIV ENLPVEEEDE NPDIIKFSLI 

       190        200        210        220        230        240 
GRPNVGKSSL INAILGEERV IASPIAGTTR DAIDTNFTDS EGQEYTMIDT AGMRKSGKVY 

       250        260        270        280        290        300 
ENTEKYSVMR SMRAIDRSDI VLMVINAEEG IREYDKRIAG FAHEAGKGII IVVNKWDTIE 

       310        320        330        340        350        360 
KDNHTVAKWE EDIRDQFQFL SYAPIIFVSA ATKQRLNKLP DMIKKISVSQ NKRIPSAVLN 

       370        380        390        400        410        420 
DVIMDAIAIN PTPTDKGKRL KIFYGTQVSV KPPTFVIFVN EEELMHFSYM RFLENQIRAA 

       430 
FGFEGTPINL IARKRK

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References

[1]"Genome sequence of Streptococcus gallolyticus: insights into its adaptation to the bovine rumen and its ability to cause endocarditis."
Rusniok C., Couve E., Da Cunha V., El Gana R., Zidane N., Bouchier C., Poyart C., Leclercq R., Trieu-Cuot P., Glaser P.
J. Bacteriol. 192:2266-2276(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: UCN34.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FN597254 Genomic DNA. Translation: CBI14312.1.
RefSeqYP_003431234.1. NC_013798.1.

3D structure databases

ProteinModelPortalD3HFJ8.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBI14312; CBI14312; GALLO_1821.
GeneID8776493.
KEGGsga:GALLO_1821.
PATRIC35287075. VBIStrGal150982_1811.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000242861.
KOK03977.
OMAYLENTYR.

Enzyme and pathway databases

BioCycSGAL637909:GJOV-2875-MONOMER.

Family and domain databases

Gene3D3.30.300.20. 1 hit.
HAMAPMF_00195. GTPase_Der.
InterProIPR016484. GTP-bd_EngA.
IPR006073. GTP_binding_domain.
IPR015946. KH_dom-like_a/b.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
[Graphical view]
PANTHERPTHR11649:SF5. PTHR11649:SF5. 1 hit.
PfamPF01926. MMR_HSR1. 2 hits.
[Graphical view]
PIRSFPIRSF006485. GTP-binding_EngA. 1 hit.
SUPFAMSSF52540. SSF52540. 2 hits.
TIGRFAMsTIGR03594. GTPase_EngA. 1 hit.
TIGR00231. small_GTP. 2 hits.
ProtoNetSearch...

Entry information

Entry nameD3HFJ8_STRG3
AccessionPrimary (citable) accession number: D3HFJ8
Entry history
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: May 29, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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