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D3H1K3 (D3H1K3_ECO44) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length676 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D3H1K3 [UniParc].

Last modified March 23, 2010. Version 1.
Checksum: B37203F2AEF80DEA

FASTA67675,768
        10         20         30         40         50         60 
MKLAACFLTL LPGFAVAASW TSPGFPAFSE QGTGTFVSHA QLPKGTRPLT LNFDQQCWQP 

        70         80         90        100        110        120 
ADAIKLNQML SLQPCSNTPP QWRLFRDGEY TLQLDTRSGT PTLMISIQNA VEPVASLVRE 

       130        140        150        160        170        180 
CPKWDGLPLT LDVSATFPEG AAVRDYYSQQ IAIVKNGQIT LQPAATSNGL LLLERAETDT 

       190        200        210        220        230        240 
SAPFDWHNAT VYFVLTDRFE NGDPSNDQSY GRHKDGMAEI GTFHGGDLRG LTNKLDYLQQ 

       250        260        270        280        290        300 
LGVNALWISA PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGSE ADLRTLVDSA 

       310        320        330        340        350        360 
HQRGIRILFD VVMNHTGYAT LADMQEYQFG ALYLSGDEVK KTLGERWSDW KPAAGQTWHS 

       370        380        390        400        410        420 
FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS LAFLPDIKTE STTASGLPVF 

       430        440        450        460        470        480 
YKNKTDTHAK VIDGFTPRDY LTHWLSQWVR DYGIDGFRVD TVKHVELPAW QQLKTEASAA 

       490        500        510        520        530        540 
LREWKKANPD KALDDKPFWM TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCLAQ 

       550        560        570        580        590        600 
MDTTWQQMAE KLQDFNVLSY LSSHDTRLFR EGGDKAAELL LLAPGAVQIF YGDESSRPFG 

       610        620        630        640        650        660 
PTGSDPLQGT RSDMNWQDVS GKSAASVAHW QKISQFRARH PAIGAGKQTT LSLKQGYGFV 

       670 
REHGDDKVLV IWAGQQ 

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References

[1]"Complete genome sequence and comparative metabolic profiling of the prototypical enteroaggregative Escherichia coli strain 042."
Chaudhuri R.R., Sebaihia M., Hobman J.L., Webber M.A., Leyton D.L., Goldberg M.D., Cunningham A.F., Scott-Tucker A., Ferguson P.R., Thomas C.M., Frankel G., Tang C.M., Dudley E.G., Roberts I.S., Rasko D.A., Pallen M.J., Parkhill J., Nataro J.P., Thomson N.R., Henderson I.R.
PLoS ONE 5:E8801-E8801(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 042 / EAEC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN554766 Genomic DNA. Translation: CBG36700.1.
RefSeqYP_006098159.1. NC_017626.1.

3D structure databases

ProteinModelPortalD3H1K3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID12884714.
KEGGelo:EC042_3877.
PATRIC36689470. VBIEscCol52250_4028.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.
OMAGQNWHSF.

Enzyme and pathway databases

BioCycECOL216592:GCV7-3919-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameD3H1K3_ECO44
AccessionPrimary (citable) accession number: D3H1K3
Entry history
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: December 11, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)