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D3H1F5 (D3H1F5_ECO44) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:EC042_2531 EMBL CBG35363.1
OrganismEscherichia coli O44:H18 (strain 042 / EAEC) [Complete proteome] [HAMAP] EMBL CBG35363.1
Taxonomic identifier216592 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length405 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionAminotransferase EMBL CBG35363.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processbiosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionpyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

transaminase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D3H1F5 [UniParc].

Last modified March 23, 2010. Version 1.
Checksum: 7D7948904BF3C388

FASTA40545,545
        10         20         30         40         50         60 
MSPIEKSSKL ENVCYDIRGP VLKEAKRLEE EGNKVLKLNI GNPAPFGFDA PDEILVDVIR 

        70         80         90        100        110        120 
NLPTAQGYCD SKGLYSARKA IMQHYQARGM RDVTVEDIYI GNGVSELIVQ AMQALLNSGD 

       130        140        150        160        170        180 
EMLVPAPDYP LWTAAVSLSS GKAVHYLCDE SSDWFPDLDD IRAKITPRTR GIVIINPNNP 

       190        200        210        220        230        240 
TGAVYSKELL MEIVEIARQH NLIIFADEIY DKILYDDAEH HSIAPLAPDL LTITFNGLSK 

       250        260        270        280        290        300 
TYRVAGFRQG WMVLNGPKKH AKGYIEGLEM LASMRLCANV PAQHAIQTAL GGYQSISEFI 

       310        320        330        340        350        360 
TPGGRLYEQR NRAWELINDI PGVSCVKPRG ALYMFPKIDA RRFNIHDDQK MVLDFLLQEK 

       370        380        390        400 
VLLVQGTAFN WPWPDHFRIV TLPRVDDIEL SLSKFARFLS GYHQL 

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References

[1]"Complete genome sequence and comparative metabolic profiling of the prototypical enteroaggregative Escherichia coli strain 042."
Chaudhuri R.R., Sebaihia M., Hobman J.L., Webber M.A., Leyton D.L., Goldberg M.D., Cunningham A.F., Scott-Tucker A., Ferguson P.R., Thomas C.M., Frankel G., Tang C.M., Dudley E.G., Roberts I.S., Rasko D.A., Pallen M.J., Parkhill J., Nataro J.P., Thomson N.R., Henderson I.R.
PLoS ONE 5:E8801-E8801(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 042 / EAEC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN554766 Genomic DNA. Translation: CBG35363.1.
RefSeqYP_006096834.1. NC_017626.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID12884511.
KEGGelo:EC042_2531.
PATRIC36686641. VBIEscCol52250_2647.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK14260.
OMAYQARDMR.

Enzyme and pathway databases

BioCycECOL216592:GCV7-2555-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD3H1F5_ECO44
AccessionPrimary (citable) accession number: D3H1F5
Entry history
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: May 14, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)