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D3FY95 (D3FY95_BACPE) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Triosephosphate isomerase HAMAP-Rule MF_00147
Short name=TIM HAMAP-Rule MF_00147
EC=5.3.1.1 HAMAP-Rule MF_00147
Alternative name(s):
Triose-phosphate isomerase HAMAP-Rule MF_00147
Gene names
Name:tpiA HAMAP-Rule MF_00147 EMBL ADC49118.1
Ordered Locus Names:BpOF4_05280 EMBL ADC49118.1
OrganismBacillus pseudofirmus (strain OF4) [Complete proteome] [HAMAP] EMBL ADC49118.1
Taxonomic identifier398511 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus ›

Protein attributes

Sequence length251 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site951Electrophile By similarity HAMAP-Rule MF_00147
Active site1671Proton acceptor By similarity HAMAP-Rule MF_00147
Binding site91Substrate By similarity HAMAP-Rule MF_00147
Binding site111Substrate By similarity HAMAP-Rule MF_00147

Amino acid modifications

Modified residue2131Phosphoserine By similarity HAMAP-Rule MF_00147

Sequences

Sequence LengthMass (Da)Tools
D3FY95 [UniParc].

Last modified March 23, 2010. Version 1.
Checksum: 9360ECE2A7E649FC

FASTA25126,967
        10         20         30         40         50         60 
MRKPIIAGNW KMNKTLGEAK QFVQEVKSNV PANSEVDAVV CSPALFLESL VSETNGTDLK 

        70         80         90        100        110        120 
VGAQNVHFEE NGAFTGEISP VALEDMNVAY VIIGHSERRE MFAETDETVN KKVHAAFKHN 

       130        140        150        160        170        180 
LVPIMCCGET DAEREAGKTN DVVREQVEKG LSGLTEDQVK ETVIAYEPIW AIGTGKSSSA 

       190        200        210        220        230        240 
ADANEVCAYI RKVVASNFSE DAANAVRIQY GGSVKPANIA EYMAQADIDG ALVGGASLEP 

       250 
KSFLELLEAG K

« Hide

References

[1]"Genome of alkaliphilic Bacillus pseudofirmus OF4 reveals adaptations that support the ability to grow in an external pH range from 7.5 to 11.4."
Janto B., Ahmed A., Ito M., Liu J., Hicks D.B., Pagni S., Fackelmayer O.J., Smith T.A., Earl J., Elbourne L.D., Hassan K., Paulsen I.T., Kolsto A.B., Tourasse N.J., Ehrlich G.D., Boissy R., Ivey D.M., Li G. expand/collapse author list , Xue Y., Ma Y., Hu F.Z., Krulwich T.A.
Environ. Microbiol. 13:3289-3309(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: OF4 EMBL ADC49118.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001878 Genomic DNA. Translation: ADC49118.1.
RefSeqYP_003426010.1. NC_013791.2.

3D structure databases

ProteinModelPortalD3FY95.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADC49118; ADC49118; BpOF4_05280.
GeneID8766043.
KEGGbpf:BpOF4_05280.
PATRIC31944564. VBIBacPse80461_1022.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000226412.
KOK01803.

Enzyme and pathway databases

BioCycBPSE398511:GJI9-3482-MONOMER.
UniPathwayUPA00109; UER00189.
UPA00138.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
HAMAPMF_00147_B. TIM_B.
InterProIPR013785. Aldolase_TIM.
IPR022896. TrioseP_Isoase_bac/euk.
IPR000652. Triosephosphate_isomerase.
IPR020861. Triosephosphate_isomerase_AS.
[Graphical view]
PANTHERPTHR21139. PTHR21139. 1 hit.
PfamPF00121. TIM. 1 hit.
[Graphical view]
SUPFAMSSF51351. Triophos_ismrse. 1 hit.
TIGRFAMsTIGR00419. tim. 1 hit.
PROSITEPS00171. TIM_1. 1 hit.
PS51440. TIM_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD3FY95_BACPE
AccessionPrimary (citable) accession number: D3FY95
Entry history
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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