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D3FT76 (D3FT76_BACPE) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:recG EMBL ADC48144.1
Ordered Locus Names:BpOF4_00375 EMBL ADC48144.1
OrganismBacillus pseudofirmus (strain OF4) [Complete proteome] [HAMAP] EMBL ADC48144.1
Taxonomic identifier398511 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length682 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D3FT76 [UniParc].

Last modified March 23, 2010. Version 1.
Checksum: CEA7E8010B4697E4

FASTA68277,654
        10         20         30         40         50         60 
MNHIMSLPVT EVKGVGEETA KQMAGMNVHT VQDLIEHFPF RYEDYQLKDL QDTKHDERVT 

        70         80         90        100        110        120 
VVGVVQSEPS IRYYGKKKNR LSVRLLVNQI LITVTFFNRA FLKKYFQIGQ EVTVTGKWDQ 

       130        140        150        160        170        180 
HRMTIAGSEC YPGRVEKEQT IVPVYSVSGK LTSKSLKKYI YQAMQQYGED IPEVLPESFL 

       190        200        210        220        230        240 
EKYKLPTKRE AIYRLHYPSK DEATKHARRR MVYEEFLFFQ LKMQAYRKIN REQSVGVPLM 

       250        260        270        280        290        300 
LDRNKVRDFV SGLPFPLTGA QKRVVKDILH DIESDYRMNR LLQGDVGSGK TIVAAVCMYA 

       310        320        330        340        350        360 
VVQAGKQAAL MVPTEILAEQ HVSSLKPLLE PFGIEVELLS GSVKGKKRRE RLERLESGEM 

       370        380        390        400        410        420 
HIAVGTHALI QEDVIFHDLG LVITDEQHRF GVEQRRVLRD KGEHPDVLFM TATPIPRTLA 

       430        440        450        460        470        480 
ISVFGDMDVS IIDEMPAGRK VIETYWAKHD MLDRVLGFIE KELQAGRQAY VICPLIEESE 

       490        500        510        520        530        540 
SLDVQNAIDV HAILQQHYGG KFKVGLMHGR LHPKEKDEVM EAFSENSTQI LVSTTVVEVG 

       550        560        570        580        590        600 
VNVPNATVMV IYDAERFGLA QLHQLRGRVG RGEAQSYCIL LADPKSEVGK ERMRIMTETN 

       610        620        630        640        650        660 
DGFVLSERDL ELRGPGDFFG SKQSGLPNFK VADVVHDYRA LEVARQDAAE LVNKADFFEN 

       670        680 
PVYSYFRKHL EESGVFAGEK LD 

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References

[1]"Genome of alkaliphilic Bacillus pseudofirmus OF4 reveals adaptations that support the ability to grow in an external pH range from 7.5 to 11.4."
Janto B., Ahmed A., Ito M., Liu J., Hicks D.B., Pagni S., Fackelmayer O.J., Smith T.A., Earl J., Elbourne L.D., Hassan K., Paulsen I.T., Kolsto A.B., Tourasse N.J., Ehrlich G.D., Boissy R., Ivey D.M., Li G. expand/collapse author list , Xue Y., Ma Y., Hu F.Z., Krulwich T.A.
Environ. Microbiol. 13:3289-3309(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: OF4 EMBL ADC48144.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001878 Genomic DNA. Translation: ADC48144.1.
RefSeqYP_003425036.1. NC_013791.2.

3D structure databases

ProteinModelPortalD3FT76.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADC48144; ADC48144; BpOF4_00375.
GeneID8765047.
KEGGbpf:BpOF4_00375.
PATRIC31942626. VBIBacPse80461_0075.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000036619.
KOK03655.

Enzyme and pathway databases

BioCycBPSE398511:GJI9-2486-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR004609. ATP-dep_DNA_helicase_RecG.
IPR011545. DNA/RNA_helicase_DEAD/DEAH_N.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view]
SMARTSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR00643. recG. 1 hit.
PROSITEPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD3FT76_BACPE
AccessionPrimary (citable) accession number: D3FT76
Entry history
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)