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D3FS30 (D3FS30_BACPE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:dcuR EMBL ADC51665.1
Ordered Locus Names:BpOF4_18120 EMBL ADC51665.1
OrganismBacillus pseudofirmus (strain OF4) [Complete proteome] [HAMAP] EMBL ADC51665.1
Taxonomic identifier398511 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length224 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D3FS30 [UniParc].

Last modified March 23, 2010. Version 1.
Checksum: C0230A5256AED4F4

FASTA22425,597
        10         20         30         40         50         60 
MVASFNKQYV EEIKGFQLAG LAKCFDEAKQ LLEENDIQLL LLDIYMPGKN GLELLQYIRK 

        70         80         90        100        110        120 
ETAYNVDVIL VTAADDVDSI QTALRYGAVD YIIKPFEFER FNKALTTYRE KHSLLKAQQS 

       130        140        150        160        170        180 
LKQEELDASI LHQQEKKNMT LPKGLTPNTL QVIAAAIVDK ENEPFTTDEI AETVQISRVS 

       190        200        210        220 
VRKYIKYLKE IGALAERMTY GAIGRPFYVY VNRNLTKSSF QDLV 

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References

[1]"Genome of alkaliphilic Bacillus pseudofirmus OF4 reveals adaptations that support the ability to grow in an external pH range from 7.5 to 11.4."
Janto B., Ahmed A., Ito M., Liu J., Hicks D.B., Pagni S., Fackelmayer O.J., Smith T.A., Earl J., Elbourne L.D., Hassan K., Paulsen I.T., Kolsto A.B., Tourasse N.J., Ehrlich G.D., Boissy R., Ivey D.M., Li G. expand/collapse author list , Xue Y., Ma Y., Hu F.Z., Krulwich T.A.
Environ. Microbiol. 13:3289-3309(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: OF4 EMBL ADC51665.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001878 Genomic DNA. Translation: ADC51665.1.
RefSeqYP_003428557.1. NC_013791.2.

3D structure databases

ProteinModelPortalD3FS30.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADC51665; ADC51665; BpOF4_18120.
GeneID8768665.
KEGGbpf:BpOF4_18120.
PATRIC31949728. VBIBacPse80461_3529.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000034816.
KOK11615.

Enzyme and pathway databases

BioCycBPSE398511:GJI9-2086-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
InterProIPR011006. CheY-like_superfamily.
IPR013196. HTH_11.
IPR024187. Sig_transdc_resp-reg_cit/mal.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF08279. HTH_11. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
PIRSFPIRSF006171. RR_citrat_malat. 1 hit.
SMARTSM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF52172. SSF52172. 1 hit.
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD3FS30_BACPE
AccessionPrimary (citable) accession number: D3FS30
Entry history
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: April 16, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)