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D3FMB5

- D3FMB5_CAMJI

UniProt

D3FMB5 - D3FMB5_CAMJI

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Protein

Alanine racemase

Gene
alr, CJSA_0851
Organism
Campylobacter jejuni subsp. jejuni (strain IA3902)
Status
Unreviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotations

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei33 – 331Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei118 – 1181Substrate By similarityUniRule annotation
Active sitei237 – 2371Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei283 – 2831Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciCJEJ567106:GLA7-877-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Name:alrImported
Ordered Locus Names:CJSA_0851Imported
OrganismiCampylobacter jejuni subsp. jejuni (strain IA3902)Imported
Taxonomic identifieri567106 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeCampylobacter
ProteomesiUP000001516: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei33 – 331N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliD3FMB5.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK01775.
OMAiVSTYDVG.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3FMB5-1 [UniParc]FASTAAdd to Basket

« Hide

MSLIKIDQKA YEYNLRHIAK KIGSFQRLIC VFKDNAYGHG AKLLAPLAKN    50
LGVSFVAVKS EEEAREIEEF FENILILSHR PHGNENSRFI YALNDISQVK 100
NYKQDIKIHL KIDTGMHRNG ICVENLEHAI NLIQGSDLKL TGMFTHFASA 150
DEMDGSFFVQ KENFQKAKKI VKKYFSNLLF HSYNSAALFR GKIPEDEYCR 200
VGLVQFGYGD SNLKRVLSLY AHRLSQRILQ KGQSIGYGGI FTAAKDMEVA 250
TYDLGYADGL FRYNGRGELV LGNGKAMLGK MSMDSFSCEN SGEEICVFKD 300
ADIWADFFHT INYEILVKLN PNIQRVLV 328
Length:328
Mass (Da):37,256
Last modified:March 23, 2010 - v1
Checksum:i1F82682833905D22
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001876 Genomic DNA. Translation: ADC28491.1.
RefSeqiYP_005656209.1. NC_017279.1.

Genome annotation databases

EnsemblBacteriaiADC28491; ADC28491; CJSA_0851.
GeneIDi12249718.
KEGGicji:CJSA_0851.
PATRICi36811597. VBICamJej152966_0891.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001876 Genomic DNA. Translation: ADC28491.1 .
RefSeqi YP_005656209.1. NC_017279.1.

3D structure databases

ProteinModelPortali D3FMB5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADC28491 ; ADC28491 ; CJSA_0851 .
GeneIDi 12249718.
KEGGi cji:CJSA_0851.
PATRICi 36811597. VBICamJej152966_0891.

Phylogenomic databases

KOi K01775.
OMAi VSTYDVG.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci CJEJ567106:GLA7-877-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of a highy virulent Campylobacter jejuni strain associated with sheep abortion in the United States."
    Sahin O., Zhang Q.
    Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: IA3902.

Entry informationi

Entry nameiD3FMB5_CAMJI
AccessioniPrimary (citable) accession number: D3FMB5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: July 9, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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