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D3FMB5 (D3FMB5_CAMJI) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length328 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201 SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site331Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2371Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1181Substrate By similarity HAMAP-Rule MF_01201
Binding site2831Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue331N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
D3FMB5 [UniParc].

Last modified March 23, 2010. Version 1.
Checksum: 1F82682833905D22

FASTA32837,256
        10         20         30         40         50         60 
MSLIKIDQKA YEYNLRHIAK KIGSFQRLIC VFKDNAYGHG AKLLAPLAKN LGVSFVAVKS 

        70         80         90        100        110        120 
EEEAREIEEF FENILILSHR PHGNENSRFI YALNDISQVK NYKQDIKIHL KIDTGMHRNG 

       130        140        150        160        170        180 
ICVENLEHAI NLIQGSDLKL TGMFTHFASA DEMDGSFFVQ KENFQKAKKI VKKYFSNLLF 

       190        200        210        220        230        240 
HSYNSAALFR GKIPEDEYCR VGLVQFGYGD SNLKRVLSLY AHRLSQRILQ KGQSIGYGGI 

       250        260        270        280        290        300 
FTAAKDMEVA TYDLGYADGL FRYNGRGELV LGNGKAMLGK MSMDSFSCEN SGEEICVFKD 

       310        320 
ADIWADFFHT INYEILVKLN PNIQRVLV

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References

[1]"Complete genome sequence of a highy virulent Campylobacter jejuni strain associated with sheep abortion in the United States."
Sahin O., Zhang Q.
Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IA3902.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001876 Genomic DNA. Translation: ADC28491.1.
RefSeqYP_005656209.1. NC_017279.1.

3D structure databases

ProteinModelPortalD3FMB5.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADC28491; ADC28491; CJSA_0851.
GeneID12249718.
KEGGcji:CJSA_0851.
PATRIC36811597. VBICamJej152966_0891.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.
OMAREGCDIF.

Enzyme and pathway databases

BioCycCJEJ567106:GLA7-877-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD3FMB5_CAMJI
AccessionPrimary (citable) accession number: D3FMB5
Entry history
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: May 29, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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