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D3FA34 (D3FA34_CONWI) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length815 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADB53129.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D3FA34 [UniParc].

Last modified March 23, 2010. Version 1.
Checksum: 470935FA8951B905

FASTA81590,361
        10         20         30         40         50         60 
MAPALDVCPI ALPGYGPPMS PRRDSLDAYR AKRDFGATIE PAPGDAAAAR SSRADDAPAE 

        70         80         90        100        110        120 
FVVQQHDATR LHWDLRLERD GTLASWALPR GLPLDPHDDR IAVRTEDHPL EYLDFHGEIP 

       130        140        150        160        170        180 
KGSYGAGTME IFDRGTYDVH EFTDRKVEVT LHGERGRAVG RYGLFPLGRR AERADGPQGD 

       190        200        210        220        230        240 
WMIHRMEPPA DPEREPLPEH LLPMLAKAGE LPAAREDDAW GYEIKWDGVR ALLWSDHGHV 

       250        260        270        280        290        300 
RVQSRTQREI AERYPEVKPI GRALGAHEVV LDGELVALDE HGKPSFERLQ SRMNAGSEGA 

       310        320        330        340        350        360 
IRRAARAVAV TYVIFDLLHL DGRSLLHEPY ATRREALRAL SLDGAAWRTP AYHRGHGAAL 

       370        380        390        400        410        420 
LAATREQGLE GIVAKRLDGV YEPGRRSGAW RKLRNRLRQE LVIGGWLEGE GNRAQRIGAL 

       430        440        450        460        470        480 
LVGDREQDGG PLRYAGRVGS GLTEAMLDDL LARLRARERA GSPFAPAPAA ARIPRGAHWV 

       490        500        510        520        530        540 
EPELVADVEY SERTSEGLLR QPVFKGLRDD KPPELVVRER ADLRGQRFSN WDKVLYPASG 

       550        560        570        580        590        600 
FTKGDLIDYY VAIAPTLLPH LQDRPITLRR WPDGVEGRSF YEKNAPSHRP DWVQTASIFS 

       610        620        630        640        650        660 
RSERRRIDYC LVQDTATLAW TANLAAIELH PSLSLARAMS HPTAVVFDLD PGEPAGLPEC 

       670        680        690        700        710        720 
AEVALVLEGL FGQLGLRSVV KTSGSKGLQV YVPLGERAAT YEQTKPFAKR IAELLERRLP 

       730        740        750        760        770        780 
DLVVARMSKR LRAGKVLVDW SQNDEHKTTV AVYAVRARDR PTVSTPLSWE ELRAAHAAGV 

       790        800        810 
ADRLAFEPAD VLARVADQGD LFASMLGSAQ ELPQL 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001854 Genomic DNA. Translation: ADB53129.1.
RefSeqYP_003396504.1. NC_013739.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADB53129; ADB53129; Cwoe_4716.
GeneID8735182.
KEGGcwo:Cwoe_4716.
PATRIC32051515. VBIConWoe21639_4746.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.
OMAEIKWDGV.

Enzyme and pathway databases

BioCycCWOE469383:GH82-4754-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD3FA34_CONWI
AccessionPrimary (citable) accession number: D3FA34
Entry history
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: May 14, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)