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D3FA34

- D3FA34_CONWI

UniProt

D3FA34 - D3FA34_CONWI

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Protein
Submitted name:

DNA ligase D

Gene
Cwoe_4716
Organism
Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCWOE469383:GH82-4754-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase DImported
Gene namesi
Ordered Locus Names:Cwoe_4716Imported
OrganismiConexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)Imported
Taxonomic identifieri469383 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaRubrobacteridaeSolirubrobacteralesConexibacteraceaeConexibacter
ProteomesiUP000008229: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiEIKWDGV.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3FA34-1 [UniParc]FASTAAdd to Basket

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MAPALDVCPI ALPGYGPPMS PRRDSLDAYR AKRDFGATIE PAPGDAAAAR    50
SSRADDAPAE FVVQQHDATR LHWDLRLERD GTLASWALPR GLPLDPHDDR 100
IAVRTEDHPL EYLDFHGEIP KGSYGAGTME IFDRGTYDVH EFTDRKVEVT 150
LHGERGRAVG RYGLFPLGRR AERADGPQGD WMIHRMEPPA DPEREPLPEH 200
LLPMLAKAGE LPAAREDDAW GYEIKWDGVR ALLWSDHGHV RVQSRTQREI 250
AERYPEVKPI GRALGAHEVV LDGELVALDE HGKPSFERLQ SRMNAGSEGA 300
IRRAARAVAV TYVIFDLLHL DGRSLLHEPY ATRREALRAL SLDGAAWRTP 350
AYHRGHGAAL LAATREQGLE GIVAKRLDGV YEPGRRSGAW RKLRNRLRQE 400
LVIGGWLEGE GNRAQRIGAL LVGDREQDGG PLRYAGRVGS GLTEAMLDDL 450
LARLRARERA GSPFAPAPAA ARIPRGAHWV EPELVADVEY SERTSEGLLR 500
QPVFKGLRDD KPPELVVRER ADLRGQRFSN WDKVLYPASG FTKGDLIDYY 550
VAIAPTLLPH LQDRPITLRR WPDGVEGRSF YEKNAPSHRP DWVQTASIFS 600
RSERRRIDYC LVQDTATLAW TANLAAIELH PSLSLARAMS HPTAVVFDLD 650
PGEPAGLPEC AEVALVLEGL FGQLGLRSVV KTSGSKGLQV YVPLGERAAT 700
YEQTKPFAKR IAELLERRLP DLVVARMSKR LRAGKVLVDW SQNDEHKTTV 750
AVYAVRARDR PTVSTPLSWE ELRAAHAAGV ADRLAFEPAD VLARVADQGD 800
LFASMLGSAQ ELPQL 815
Length:815
Mass (Da):90,361
Last modified:March 23, 2010 - v1
Checksum:i470935FA8951B905
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001854 Genomic DNA. Translation: ADB53129.1.
RefSeqiYP_003396504.1. NC_013739.1.

Genome annotation databases

EnsemblBacteriaiADB53129; ADB53129; Cwoe_4716.
GeneIDi8735182.
KEGGicwo:Cwoe_4716.
PATRICi32051515. VBIConWoe21639_4746.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001854 Genomic DNA. Translation: ADB53129.1 .
RefSeqi YP_003396504.1. NC_013739.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADB53129 ; ADB53129 ; Cwoe_4716 .
GeneIDi 8735182.
KEGGi cwo:Cwoe_4716.
PATRICi 32051515. VBIConWoe21639_4746.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi EIKWDGV.

Enzyme and pathway databases

BioCyci CWOE469383:GH82-4754-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14684 / JCM 11494 / NBRC 100937 / ID131577.

Entry informationi

Entry nameiD3FA34_CONWI
AccessioniPrimary (citable) accession number: D3FA34
Entry historyi
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: May 14, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3