Cytochrome-c oxidase precursor - Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)

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D3F348 (D3F348_CONWI) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 24. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Cytochrome-c oxidase EMBL ADB50328.1
EC=1.9.3.1 EMBL ADB50328.1

Gene names

Ordered Locus Names:

Cwoe_1902

Organism

Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) [Complete proteome] [HAMAP] EMBL ADB50328.1

Taxonomic identifier

469383 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Rubrobacteridae › Solirubrobacterales › Conexibacteraceae › Conexibacter ›

Protein attributes

Sequence length	638 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the heme-copper respiratory oxidase family. RuleBase RU000370

Ontologies

Keywords
Biological process	Electron transport Respiratory chain RuleBase RU000370 Transport
Cellular component	Membrane
Domain	Signal EMBL ADB50328.1 Transmembrane RuleBase RU000370
Ligand	Heme RuleBase RU000370 Iron Metal-binding
Molecular function	Oxidoreductase RuleBase RU000370 EMBL ADB50328.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	aerobic respiration Inferred from electronic annotation. Source: InterPro electron transport chain Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW respiratory chain Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	cytochrome-c oxidase activity Inferred from electronic annotation. Source: EC electron carrier activity Inferred from electronic annotation. Source: InterPro heme binding Inferred from electronic annotation. Source: InterPro iron ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Signal peptide

1 – 25

Potential EMBL ADB50328.1

Chain

26 – 638

613

Potential EMBL ADB50328.1

PRO_5000569312

Sequences

Sequence

Length

Mass (Da)

Tools

D3F348 [UniParc].

Last modified March 23, 2010. Version 1.
Checksum: B72E47B2D6C95839
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FASTA

638

70,299

        10         20         30         40         50         60 
MTAKLRAPGW YRAALFVLLG LAFAYVLVGV GRTAMHFPDA WSDGEAITNV ALIAMPLFFL 

        70         80         90        100        110        120 
VGLGCFDYWF YYAAGRPTRA EDHSSHGATS WKDYFRVNTD HKVIGIQYVV TSFFFLFLGG 

       130        140        150        160        170        180 
LIAMLMRAEL AQPGMQFVDS STFNGLFSVH AALLIFLFVI PVFAGIANYV LPLMIGAPDM 

       190        200        210        220        230        240 
AFPRLNALSF WMLPPAGILL TASFFAPGGA FASGWTAYAP LSTEMPLGQA FFTIGVQFAG 

       250        260        270        280        290        300 
AASIATALNF LVTIITMRAP GMSFFRMPLL VWANFATSLL VVIATPFIAA SQFFVLLDRA 

       310        320        330        340        350        360 
LGFQYFDAFV GAGKDGSVLM YQHVFWFYSH PAVYIMMLPG FGIVSEIISV KSRKPIFGYR 

       370        380        390        400        410        420 
MMAFSLLAIV VLGFTVWAHH MFVSGMQNWI RIPMMITTAI IAVPTGIKIF SWLATMWRGV 

       430        440        450        460        470        480 
LHLDTPMLFA LGFLTTFTLG GISGVMLSMI PFDIYVSDTY FIVAHIHYVL FGGSLFTIFA 

       490        500        510        520        530        540 
GVYYWFPKMT GRMYDETLGK IHFWATFVFF NVTFGPMHLL GLDGMPRRVA DYAEQFAALN 

       550        560        570        580        590        600 
LFVSIASFLL GLSMLVFLYN MVVSWRGGPR AAANPWRALT LEWQVSSPPP IFNFDAVPTV 

       610        620        630 
VGGPYEYGVP GAVHGIFQSP AEAKPTPAGS VATSPSRE

« Hide

References

[1]

"The complete genome of Conexibacter woesei DSM 14684."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F.

Eisen J.A.
Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 14684 / JCM 11494 / NBRC 100937 / ID131577.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001854 Genomic DNA. Translation: ADB50328.1.
RefSeq	YP_003393703.1. NC_013739.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADB50328; ADB50328; Cwoe_1902.
GeneID	8732343.
KEGG	cwo:Cwoe_1902.
PATRIC	32045793. VBIConWoe21639_1908.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000085274.
KO	K02274.
Enzyme and pathway databases
BioCyc	CWOE469383:GH82-1915-MONOMER.
Family and domain databases
Gene3D	1.20.210.10. 1 hit.
InterPro	IPR000883. Cyt_c_Oxase_su1. IPR023615. Cyt_c_Oxase_su1_BS. IPR023616. Cyt_c_Oxase_su1_dom. [Graphical view]
PANTHER	PTHR10422. PTHR10422. 1 hit.
Pfam	PF00115. COX1. 1 hit. [Graphical view]
PRINTS	PR01165. CYCOXIDASEI.
SUPFAM	SSF81442. COX1. 1 hit.
PROSITE	PS50855. COX1. 1 hit. PS00077. COX1_CUB. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D3F348_CONWI

Accession

Primary (citable) accession number: D3F348

Entry history

Integrated into UniProtKB/TrEMBL:	March 23, 2010
Last sequence update:	March 23, 2010
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Molecule processing

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

Entry information