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Protein
Submitted name:

Transcriptional regulator, LuxR family

Gene

Cwoe_3826

Organism
Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi475 – 494H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Enzyme and pathway databases

BioCyciCWOE469383:GH82-3835-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, LuxR familyImported
Gene namesi
Ordered Locus Names:Cwoe_3826Imported
OrganismiConexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)Imported
Taxonomic identifieri469383 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaThermoleophiliaSolirubrobacteralesConexibacteraceaeConexibacter
Proteomesi
  • UP000008229 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi469383.Cwoe_3826.

Structurei

3D structure databases

ProteinModelPortaliD3F2H7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini451 – 516HTH luxR-type DNA-bindingInterPro annotationAdd BLAST66

Phylogenomic databases

eggNOGiENOG4105DHT. Bacteria.
COG2206. LUCA.
COG2771. LUCA.
HOGENOMiHOG000268981.
OMAiTRCQRGA.
OrthoDBiPOG091H09F9.

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiView protein in InterPro
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF00196. GerE. 1 hit.
PRINTSiPR00038. HTHLUXR.
SMARTiView protein in SMART
SM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiView protein in PROSITE
PS50043. HTH_LUXR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

D3F2H7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MREPCLAQPL RLAELIGALS LATDLGLGLP QEHVLRQCRI AVALGAAVGA
60 70 80 90 100
GDDDQAAAYY VALLAWVGCT ADSHELAGLF GDDIALRAQS YAVDRGGLPM
110 120 130 140 150
LGFLLRRVGS GRPPLRRARM AASLVATNGR DVAAAMTTHC QVASQMAQRL
160 170 180 190 200
GLGPEISGPL RLVFARWDGK GLPKGVAGDE LPVAVRLVQL ADIVEVHHRD
210 220 230 240 250
GGVEAAVKVA RERAGGQLDP LLVTAFCDHA DALLGPLEDE PSWDAVLRAE
260 270 280 290 300
PGPGRLLTAE RLDEALEAVA DFTDLKSPWF AGHSRGVSAL AGRAAASAGL
310 320 330 340 350
PPEEIGAVRS AALVHDLGRI GIPTTIWDKP GPLTDAERER VRLHPYYTER
360 370 380 390 400
MLARSPALAR LGAIAACDHE RLDGSGYHRG LTGAALSPAA RILAAADACQ
410 420 430 440 450
AMSEPRPYRP PLEPDAAAAE LRGDVRAGRL DGDAVEDVLA AAGHRRATAR
460 470 480 490 500
SRARPAGLTA RELEVLVLVA RGASAREVAG ELVIAEKTAR NHVECVYGKL
510
GVSSRAEATL YAMRHGLVS
Length:519
Mass (Da):54,568
Last modified:March 23, 2010 - v1
Checksum:iCD17A8170F7CC7AD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001854 Genomic DNA. Translation: ADB52243.1.
RefSeqiWP_012935294.1. NC_013739.1.

Genome annotation databases

EnsemblBacteriaiADB52243; ADB52243; Cwoe_3826.
KEGGicwo:Cwoe_3826.
PATRICi32049691. VBIConWoe21639_3843.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001854 Genomic DNA. Translation: ADB52243.1.
RefSeqiWP_012935294.1. NC_013739.1.

3D structure databases

ProteinModelPortaliD3F2H7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi469383.Cwoe_3826.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADB52243; ADB52243; Cwoe_3826.
KEGGicwo:Cwoe_3826.
PATRICi32049691. VBIConWoe21639_3843.

Phylogenomic databases

eggNOGiENOG4105DHT. Bacteria.
COG2206. LUCA.
COG2771. LUCA.
HOGENOMiHOG000268981.
OMAiTRCQRGA.
OrthoDBiPOG091H09F9.

Enzyme and pathway databases

BioCyciCWOE469383:GH82-3835-MONOMER.

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiView protein in InterPro
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF00196. GerE. 1 hit.
PRINTSiPR00038. HTHLUXR.
SMARTiView protein in SMART
SM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiView protein in PROSITE
PS50043. HTH_LUXR_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD3F2H7_CONWI
AccessioniPrimary (citable) accession number: D3F2H7
Entry historyiIntegrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: February 15, 2017
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.