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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Cwoe_5554

Organism
Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciCWOE469383:GH82-5570-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Cwoe_5554Imported
OrganismiConexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)Imported
Taxonomic identifieri469383 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaThermoleophiliaSolirubrobacteralesConexibacteraceaeConexibacter
Proteomesi
  • UP000008229 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi469383.Cwoe_5554.

Structurei

3D structure databases

ProteinModelPortaliD3F0M5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini23 – 188DNA_LIGASE_A3InterPro annotationAdd BLAST166
Domaini209 – 302DNA_ligase_A_CInterPro annotationAdd BLAST94

Phylogenomic databases

eggNOGiENOG4105GN4. Bacteria.
COG1793. LUCA.
HOGENOMiHOG000222508.
OMAiAGFRWHK.
OrthoDBiPOG091H08HZ.

Family and domain databases

InterProiView protein in InterPro
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
PfamiView protein in Pfam
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiView protein in PROSITE
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.

Sequencei

Sequence statusi: Complete.

D3F0M5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALVLSPPLS PQLARSRSSL PSGDEWAYEP KFDGFRAIAF VEGDEVRIQS
60 70 80 90 100
RGGRPLERYF PELRFPPGRY VVDGEIVIEG EDGQQDFDLL SQRIHPAASR
110 120 130 140 150
IELLSVQTPA RFIAFDLLAD ADASLLERPF SERRAALEAL DAPGLELTPL
160 170 180 190 200
VRTAEEAEAW LRSAEGVVAK ELAAPYKPGE RAGMAKIKRV RTIDAVITGW
210 220 230 240 250
RPGKEPFTVG SLILGLYDAD GELRVVGHTS SLRAAERREL VDRLRPYETG
260 270 280 290 300
ERGSADPSRW KNDKDLEWVA LRPELVVEIS FDHVSGRRIR HGAKLKRWRE
310
DKPAAECRIE QLAD
Length:314
Mass (Da):35,141
Last modified:March 23, 2010 - v1
Checksum:i7AA886BCE0A51F3A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001854 Genomic DNA. Translation: ADB53959.1.
RefSeqiWP_012937010.1. NC_013739.1.

Genome annotation databases

EnsemblBacteriaiADB53959; ADB53959; Cwoe_5554.
KEGGicwo:Cwoe_5554.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiD3F0M5_CONWI
AccessioniPrimary (citable) accession number: D3F0M5
Entry historyiIntegrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: June 7, 2017
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported