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D3F0M5

- D3F0M5_CONWI

UniProt

D3F0M5 - D3F0M5_CONWI

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Cwoe_5554

Organism
Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (23 Mar 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciCWOE469383:GH82-5601-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Cwoe_5554Imported
    OrganismiConexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)Imported
    Taxonomic identifieri469383 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaRubrobacteridaeSolirubrobacteralesConexibacteraceaeConexibacter
    ProteomesiUP000008229: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD3F0M5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiHERTADC.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3F0M5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MALVLSPPLS PQLARSRSSL PSGDEWAYEP KFDGFRAIAF VEGDEVRIQS    50
    RGGRPLERYF PELRFPPGRY VVDGEIVIEG EDGQQDFDLL SQRIHPAASR 100
    IELLSVQTPA RFIAFDLLAD ADASLLERPF SERRAALEAL DAPGLELTPL 150
    VRTAEEAEAW LRSAEGVVAK ELAAPYKPGE RAGMAKIKRV RTIDAVITGW 200
    RPGKEPFTVG SLILGLYDAD GELRVVGHTS SLRAAERREL VDRLRPYETG 250
    ERGSADPSRW KNDKDLEWVA LRPELVVEIS FDHVSGRRIR HGAKLKRWRE 300
    DKPAAECRIE QLAD 314
    Length:314
    Mass (Da):35,141
    Last modified:March 23, 2010 - v1
    Checksum:i7AA886BCE0A51F3A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001854 Genomic DNA. Translation: ADB53959.1.
    RefSeqiWP_012937010.1. NC_013739.1.
    YP_003397334.1. NC_013739.1.

    Genome annotation databases

    EnsemblBacteriaiADB53959; ADB53959; Cwoe_5554.
    GeneIDi8736029.
    KEGGicwo:Cwoe_5554.
    PATRICi32053191. VBIConWoe21639_5576.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001854 Genomic DNA. Translation: ADB53959.1 .
    RefSeqi WP_012937010.1. NC_013739.1.
    YP_003397334.1. NC_013739.1.

    3D structure databases

    ProteinModelPortali D3F0M5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADB53959 ; ADB53959 ; Cwoe_5554 .
    GeneIDi 8736029.
    KEGGi cwo:Cwoe_5554.
    PATRICi 32053191. VBIConWoe21639_5576.

    Phylogenomic databases

    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi HERTADC.

    Enzyme and pathway databases

    BioCyci CWOE469383:GH82-5601-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 14684 / JCM 11494 / NBRC 100937 / ID131577Imported.

    Entry informationi

    Entry nameiD3F0M5_CONWI
    AccessioniPrimary (citable) accession number: D3F0M5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 23, 2010
    Last sequence update: March 23, 2010
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3