Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ATP dependent DNA ligase

Gene

Cwoe_5554

Organism
Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCWOE469383:GH82-5601-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Cwoe_5554Imported
OrganismiConexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)Imported
Taxonomic identifieri469383 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaThermoleophiliaSolirubrobacteralesConexibacteraceaeConexibacter
ProteomesiUP000008229 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi469383.Cwoe_5554.

Structurei

3D structure databases

ProteinModelPortaliD3F0M5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222508.
OMAiHERTADC.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3F0M5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALVLSPPLS PQLARSRSSL PSGDEWAYEP KFDGFRAIAF VEGDEVRIQS
60 70 80 90 100
RGGRPLERYF PELRFPPGRY VVDGEIVIEG EDGQQDFDLL SQRIHPAASR
110 120 130 140 150
IELLSVQTPA RFIAFDLLAD ADASLLERPF SERRAALEAL DAPGLELTPL
160 170 180 190 200
VRTAEEAEAW LRSAEGVVAK ELAAPYKPGE RAGMAKIKRV RTIDAVITGW
210 220 230 240 250
RPGKEPFTVG SLILGLYDAD GELRVVGHTS SLRAAERREL VDRLRPYETG
260 270 280 290 300
ERGSADPSRW KNDKDLEWVA LRPELVVEIS FDHVSGRRIR HGAKLKRWRE
310
DKPAAECRIE QLAD
Length:314
Mass (Da):35,141
Last modified:March 23, 2010 - v1
Checksum:i7AA886BCE0A51F3A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001854 Genomic DNA. Translation: ADB53959.1.
RefSeqiWP_012937010.1. NC_013739.1.

Genome annotation databases

EnsemblBacteriaiADB53959; ADB53959; Cwoe_5554.
KEGGicwo:Cwoe_5554.
PATRICi32053191. VBIConWoe21639_5576.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001854 Genomic DNA. Translation: ADB53959.1.
RefSeqiWP_012937010.1. NC_013739.1.

3D structure databases

ProteinModelPortaliD3F0M5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi469383.Cwoe_5554.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADB53959; ADB53959; Cwoe_5554.
KEGGicwo:Cwoe_5554.
PATRICi32053191. VBIConWoe21639_5576.

Phylogenomic databases

HOGENOMiHOG000222508.
OMAiHERTADC.

Enzyme and pathway databases

BioCyciCWOE469383:GH82-5601-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14684 / JCM 11494 / NBRC 100937 / ID131577Imported.

Entry informationi

Entry nameiD3F0M5_CONWI
AccessioniPrimary (citable) accession number: D3F0M5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: July 22, 2015
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.