D3F0M5 (D3F0M5_CONWI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ADB53959.1

Gene names

Ordered Locus Names:

Cwoe_5554 EMBL ADB53959.1

Organism

Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) [Complete proteome] [HAMAP] EMBL ADB53959.1

Taxonomic identifier

469383 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Rubrobacteridae › Solirubrobacterales › Conexibacteraceae › Conexibacter › Conexibacter woesei

Protein attributes

Sequence length	314 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADB53959.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3F0M5 [UniParc]. Last modified March 23, 2010. Version 1. Checksum: 7AA886BCE0A51F3A	FASTA	314	35,141
	10 20 30 40 50 60 MALVLSPPLS PQLARSRSSL PSGDEWAYEP KFDGFRAIAF VEGDEVRIQS RGGRPLERYF 70 80 90 100 110 120 PELRFPPGRY VVDGEIVIEG EDGQQDFDLL SQRIHPAASR IELLSVQTPA RFIAFDLLAD 130 140 150 160 170 180 ADASLLERPF SERRAALEAL DAPGLELTPL VRTAEEAEAW LRSAEGVVAK ELAAPYKPGE 190 200 210 220 230 240 RAGMAKIKRV RTIDAVITGW RPGKEPFTVG SLILGLYDAD GELRVVGHTS SLRAAERREL 250 260 270 280 290 300 VDRLRPYETG ERGSADPSRW KNDKDLEWVA LRPELVVEIS FDHVSGRRIR HGAKLKRWRE 310 DKPAAECRIE QLAD

References

[1]

"The complete genome of Conexibacter woesei DSM 14684." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F. , Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Pukall R., Steenblock K., Schneider S., Klenk H.-P., Eisen J.A. Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 14684 / JCM 11494 / NBRC 100937 / ID131577.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001854 Genomic DNA. Translation: ADB53959.1.
RefSeq	YP_003397334.1. NC_013739.1.
3D structure databases
ProteinModelPortal	D3F0M5.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADB53959; ADB53959; Cwoe_5554.
GeneID	8736029.
KEGG	cwo:Cwoe_5554.
PATRIC	32053191. VBIConWoe21639_5576.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000222508.
KO	K01971.
Enzyme and pathway databases
BioCyc	CWOE469383:GH82-5601-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS00333. DNA_LIGASE_A2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D3F0M5_CONWI

Accession

Primary (citable) accession number: D3F0M5

Entry history

Integrated into UniProtKB/TrEMBL:	March 23, 2010
Last sequence update:	March 23, 2010
Last modified:	May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)