Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

D3F0M5

- D3F0M5_CONWI

UniProt

D3F0M5 - D3F0M5_CONWI

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Cwoe_5554

Organism
Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCWOE469383:GH82-5601-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Cwoe_5554Imported
OrganismiConexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)Imported
Taxonomic identifieri469383 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaRubrobacteridaeSolirubrobacteralesConexibacteraceaeConexibacter
ProteomesiUP000008229: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD3F0M5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3F0M5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALVLSPPLS PQLARSRSSL PSGDEWAYEP KFDGFRAIAF VEGDEVRIQS
60 70 80 90 100
RGGRPLERYF PELRFPPGRY VVDGEIVIEG EDGQQDFDLL SQRIHPAASR
110 120 130 140 150
IELLSVQTPA RFIAFDLLAD ADASLLERPF SERRAALEAL DAPGLELTPL
160 170 180 190 200
VRTAEEAEAW LRSAEGVVAK ELAAPYKPGE RAGMAKIKRV RTIDAVITGW
210 220 230 240 250
RPGKEPFTVG SLILGLYDAD GELRVVGHTS SLRAAERREL VDRLRPYETG
260 270 280 290 300
ERGSADPSRW KNDKDLEWVA LRPELVVEIS FDHVSGRRIR HGAKLKRWRE
310
DKPAAECRIE QLAD
Length:314
Mass (Da):35,141
Last modified:March 23, 2010 - v1
Checksum:i7AA886BCE0A51F3A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001854 Genomic DNA. Translation: ADB53959.1.
RefSeqiYP_003397334.1. NC_013739.1.

Genome annotation databases

EnsemblBacteriaiADB53959; ADB53959; Cwoe_5554.
GeneIDi8736029.
KEGGicwo:Cwoe_5554.
PATRICi32053191. VBIConWoe21639_5576.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001854 Genomic DNA. Translation: ADB53959.1 .
RefSeqi YP_003397334.1. NC_013739.1.

3D structure databases

ProteinModelPortali D3F0M5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADB53959 ; ADB53959 ; Cwoe_5554 .
GeneIDi 8736029.
KEGGi cwo:Cwoe_5554.
PATRICi 32053191. VBIConWoe21639_5576.

Phylogenomic databases

HOGENOMi HOG000222508.
KOi K01971.
OMAi HERTADC.

Enzyme and pathway databases

BioCyci CWOE469383:GH82-5601-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14684 / JCM 11494 / NBRC 100937 / ID131577Imported.

Entry informationi

Entry nameiD3F0M5_CONWI
AccessioniPrimary (citable) accession number: D3F0M5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: October 29, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3