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Protein
Submitted name:

Poly(Beta-D-mannuronate) lyase

Gene

GYMC10_5367

Organism
Geobacillus sp. (strain Y412MC10)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciPSP481743:GH8K-5327-MONOMER.

Protein family/group databases

CAZyiCBM32. Carbohydrate-Binding Module Family 32.
PL7. Polysaccharide Lyase Family 7.

Names & Taxonomyi

Protein namesi
Submitted name:
Poly(Beta-D-mannuronate) lyaseImported (EC:4.2.2.3Imported)
Gene namesi
Ordered Locus Names:GYMC10_5367Imported
OrganismiGeobacillus sp. (strain Y412MC10)Imported
Taxonomic identifieri481743 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
Proteomesi
  • UP000002381 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 32Sequence analysisAdd BLAST32
ChainiPRO_500304369333 – 439Sequence analysisAdd BLAST407

Interactioni

Protein-protein interaction databases

STRINGi481743.GYMC10_5367.

Structurei

3D structure databases

ProteinModelPortaliD3EHA3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 165F5/8 type CInterPro annotationAdd BLAST145

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4106SBQ. Bacteria.
ENOG410YIGY. LUCA.
HOGENOMiHOG000065548.
OMAiSMAANES.
OrthoDBiPOG091H0F7M.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
2.60.120.260. 1 hit.
InterProiIPR014895. Alginate_lyase_2.
IPR013320. ConA-like_dom.
IPR000421. FA58C.
IPR008979. Galactose-bd-like.
[Graphical view]
PfamiPF08787. Alginate_lyase2. 1 hit.
PF00754. F5_F8_type_C. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF49899. SSF49899. 1 hit.
PROSITEiPS50022. FA58C_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3EHA3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRRFALPKR ITFCLISAAM LLAPLFEGQS MAANESKYPA SASASSYDTR
60 70 80 90 100
CACDASKAVD GNLSTRWSGE GNGTWLRLDL GSAQTVSLVK IAFYNGDSRT
110 120 130 140 150
FTFDIQTSSD GSNWLQARNA VTSALNNQLQ SFSIPVAEAR YVRIVGYGNT
160 170 180 190 200
SNDWNSYTEV EIWGDPTDGG GGALDPAKPP SGNFDLTKWK ITLPDASEIP
210 220 230 240 250
ASALAGGYEH PGWFYTDPVN GGMVFTSPNI GETTTNSTYT RSELREMLNP
260 270 280 290 300
STNSASSWAN NWVTSTSSPS IKSQAGGVDG TMKATLRVDR VSVSGNEADK
310 320 330 340 350
IGRVVVGQIH GPSTEPIRLY YHKRPSDSRG AVYFGTDDLD NNNTWVNILG
360 370 380 390 400
GPNQLNPVNG IALGQKWSYE IKVTGLFMTV KVIPEGGSAT TVNHTLPSGY
410 420 430
NDKYLYFKAG VYNQNKSDTT SDQSDHVKAT FFSLTHMHP
Length:439
Mass (Da):47,523
Last modified:March 23, 2010 - v1
Checksum:i7BD8DEBBC51888E0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001793 Genomic DNA. Translation: ACX67576.1.
RefSeqiWP_015737343.1. NC_013406.1.

Genome annotation databases

EnsemblBacteriaiACX67576; ACX67576; GYMC10_5367.
KEGGigym:GYMC10_5367.
PATRICi32159273. VBIGeoSp56627_5336.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001793 Genomic DNA. Translation: ACX67576.1.
RefSeqiWP_015737343.1. NC_013406.1.

3D structure databases

ProteinModelPortaliD3EHA3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi481743.GYMC10_5367.

Protein family/group databases

CAZyiCBM32. Carbohydrate-Binding Module Family 32.
PL7. Polysaccharide Lyase Family 7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACX67576; ACX67576; GYMC10_5367.
KEGGigym:GYMC10_5367.
PATRICi32159273. VBIGeoSp56627_5336.

Phylogenomic databases

eggNOGiENOG4106SBQ. Bacteria.
ENOG410YIGY. LUCA.
HOGENOMiHOG000065548.
OMAiSMAANES.
OrthoDBiPOG091H0F7M.

Enzyme and pathway databases

BioCyciPSP481743:GH8K-5327-MONOMER.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
2.60.120.260. 1 hit.
InterProiIPR014895. Alginate_lyase_2.
IPR013320. ConA-like_dom.
IPR000421. FA58C.
IPR008979. Galactose-bd-like.
[Graphical view]
PfamiPF08787. Alginate_lyase2. 1 hit.
PF00754. F5_F8_type_C. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF49899. SSF49899. 1 hit.
PROSITEiPS50022. FA58C_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiD3EHA3_GEOS4
AccessioniPrimary (citable) accession number: D3EHA3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: November 2, 2016
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.