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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

GYMC10_2998

Organism
Geobacillus sp. (strain Y412MC10)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciPSP481743:GH8K-3045-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:GYMC10_2998Imported
OrganismiGeobacillus sp. (strain Y412MC10)Imported
Taxonomic identifieri481743 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000002381: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD3EED5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000230831.
KOiK01601.
OMAiMVSINSI.
OrthoDBiEOG62K1SK.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3EED5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METNRVTATY LVETPLTLEQ AAASIAGEQS TGTFTAVPGE TEPLKERHGA
60 70 80 90 100
RIERITPLEQ VAQPSLPGAL APPAAQGCYS RGEIVVSFPL HNFGPSIPNL
110 120 130 140 150
MACVAGNLYE LRELSGLRLV DLELPEDFKT RYPGPRFGIE GTRRITGVRG
160 170 180 190 200
RPIIGTIIKP SVGLGRAELE ALVYDLAVSG VDFIKDDELN ANPPYLPLRE
210 220 230 240 250
KAETVMRAIG RAADKTGRKA MYACNITGDI EELQRNHEHV VKAGGNCVMV
260 270 280 290 300
SINSIGFAGL AYLNGFSEVP VHGHRNQWGM LTRHGQLGMD FRVYQKLCRL
310 320 330 340 350
AGADHLHVNG LGSKFYESDE SVARSVEACL QPMWDGYSAM PVLSSGQWAG
360 370 380 390 400
TAETTFERTR SVDVMHLAGG GILAHPDGPA AGVESMKQGW EAAMRGIPAE
410 420
EYAKERVELR RAFDKFKHKE RAL
Length:423
Mass (Da):46,076
Last modified:March 23, 2010 - v1
Checksum:i1F75F8075F272EC4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001793 Genomic DNA. Translation: ACX65265.1.
RefSeqiWP_015735252.1. NC_013406.1.
YP_003243072.1. NC_013406.1.

Genome annotation databases

EnsemblBacteriaiACX65265; ACX65265; GYMC10_2998.
GeneIDi8517182.
KEGGigym:GYMC10_2998.
PATRICi32154597. VBIGeoSp56627_3010.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001793 Genomic DNA. Translation: ACX65265.1.
RefSeqiWP_015735252.1. NC_013406.1.
YP_003243072.1. NC_013406.1.

3D structure databases

ProteinModelPortaliD3EED5.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACX65265; ACX65265; GYMC10_2998.
GeneIDi8517182.
KEGGigym:GYMC10_2998.
PATRICi32154597. VBIGeoSp56627_3010.

Phylogenomic databases

HOGENOMiHOG000230831.
KOiK01601.
OMAiMVSINSI.
OrthoDBiEOG62K1SK.

Enzyme and pathway databases

BioCyciPSP481743:GH8K-3045-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Geobacillus sp. Y412MC10."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Brumm P., Mead D.
    Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y412MC10Imported.

Entry informationi

Entry nameiD3EED5_GEOS4
AccessioniPrimary (citable) accession number: D3EED5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: February 4, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.