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D3EED5 (D3EED5_GEOS4) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ACX65265.1
Gene names
Ordered Locus Names:GYMC10_2998 EMBL ACX65265.1
OrganismGeobacillus sp. (strain Y412MC10) [Complete proteome] [HAMAP] EMBL ACX65265.1
Taxonomic identifier481743 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus

Protein attributes

Sequence length423 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ACX65265.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D3EED5 [UniParc].

Last modified March 23, 2010. Version 1.
Checksum: 1F75F8075F272EC4

FASTA42346,076
        10         20         30         40         50         60 
METNRVTATY LVETPLTLEQ AAASIAGEQS TGTFTAVPGE TEPLKERHGA RIERITPLEQ 

        70         80         90        100        110        120 
VAQPSLPGAL APPAAQGCYS RGEIVVSFPL HNFGPSIPNL MACVAGNLYE LRELSGLRLV 

       130        140        150        160        170        180 
DLELPEDFKT RYPGPRFGIE GTRRITGVRG RPIIGTIIKP SVGLGRAELE ALVYDLAVSG 

       190        200        210        220        230        240 
VDFIKDDELN ANPPYLPLRE KAETVMRAIG RAADKTGRKA MYACNITGDI EELQRNHEHV 

       250        260        270        280        290        300 
VKAGGNCVMV SINSIGFAGL AYLNGFSEVP VHGHRNQWGM LTRHGQLGMD FRVYQKLCRL 

       310        320        330        340        350        360 
AGADHLHVNG LGSKFYESDE SVARSVEACL QPMWDGYSAM PVLSSGQWAG TAETTFERTR 

       370        380        390        400        410        420 
SVDVMHLAGG GILAHPDGPA AGVESMKQGW EAAMRGIPAE EYAKERVELR RAFDKFKHKE 


RAL 

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References

[1]"Complete sequence of Geobacillus sp. Y412MC10."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Brumm P., Mead D.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Y412MC10.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001793 Genomic DNA. Translation: ACX65265.1.
RefSeqYP_003243072.1. NC_013406.1.

3D structure databases

ProteinModelPortalD3EED5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX65265; ACX65265; GYMC10_2998.
GeneID8517182.
KEGGgym:GYMC10_2998.
PATRIC32154597. VBIGeoSp56627_3010.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000230831.
KOK01601.
OMADYARDHP.
OrthoDBEOG62K1SK.

Enzyme and pathway databases

BioCycPSP481743:GH8K-3045-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD3EED5_GEOS4
AccessionPrimary (citable) accession number: D3EED5
Entry history
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: May 14, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)