D3EDU4 (D3EDU4_GEOS4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-galactosidase EMBL ACX63067.1
EC=3.2.1.23 EMBL ACX63067.1

Gene names

Ordered Locus Names:

GYMC10_0767

Organism

Geobacillus sp. (strain Y412MC10) [Complete proteome] [HAMAP] EMBL ACX63067.1

Taxonomic identifier

481743 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Paenibacillaceae › Paenibacillus

Protein attributes

Sequence length	1042 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. SAAS SAAS013812

Ontologies

Keywords
Molecular function	Glycosidase SAAS SAAS023230 EMBL ACX63067.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	beta-galactosidase complex Inferred from electronic annotation. Source: InterPro
Molecular_function	beta-galactosidase activity Inferred from electronic annotation. Source: EC carbohydrate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3EDU4 [UniParc]. Last modified March 23, 2010. Version 1. Checksum: 58782DA248888E68	FASTA	1,042	119,139
	10 20 30 40 50 60 MRTKFIYQAP ANGYPEWNNN PNIFQLNRHK AHAYMMNFPT ESEALSLDHA MSPWYQSLNG 70 80 90 100 110 120 TWKFAFAKTP EERIQNFYEA DYDSESWADL PVPSHWQLQG YDYPQYTNVR YPWAESEPEL 130 140 150 160 170 180 KAPFAPTRYN PVGSYIREFT VPDTWKEQPV YISFQGVESA FYVWVNGEMV GYSEDTFTPA 190 200 210 220 230 240 EFDLTPYLVE GKNKLAVEVY RWCDASWLED QDFWRLSGIF REVYLYSVPA VHISDFFVRP 250 260 270 280 290 300 VLDDEYRHAE LQIDAAVTNY YNETIDKDTL QLEALLYDQD RQLVQKQTLT IADYIIDEGS 310 320 330 340 350 360 FTLSMNVPEP EKWSAESPYL YTVVLALKNT DGACRGAVSC RTGFRRFELK DGLMRINGQR 370 380 390 400 410 420 ILFKGVNRHE FSPDTGRALS REDMITDIEL MKTHNINAVR TSHYPNQSVW YDLCDEYGLY 430 440 450 460 470 480 VIDETNLETH GTWRYGQQEL EETVPGSKLE WRDNVLDRCN SMFQRDKNHP SVIIWSLGNE 490 500 510 520 530 540 SFGGDNFIAM HDFLKEADPS RLVHYEGIFH YRASEAASDM ESTMYARPQD VEKYANSNPD 550 560 570 580 590 600 KPYIICEYSH AMGNSCGGLH LYWELFEKYD ILQGAFIWDW IDQAILTQTA DGIPYLAYGG 610 620 630 640 650 660 DFNETPHDGN FSGNGLIFAD RTKTPKLDEV KKCYQNVKFE SLDPAASRIR VSNRFLFTSL 670 680 690 700 710 720 DSYLVQWDVT LNGKVSQSGT LELSLQPGEQ AEIHVPYSPV EDEGKEAILT VSLVRKESTK 730 740 750 760 770 780 WAPAGHEEAW EQFVLTPYIA EQPETDALAN VQALEAAESD EELIIRGSAV SLRFRLGTGD 790 800 810 820 830 840 LTSYALSGRE CLLAPARPNF WRAVTDNDLG NRLPERSGVW RTAHDRRKLL SLRWHAEGPA 850 860 870 880 890 900 VVVSSHYRIE TNPVSSLTLE YRIYPDGTVR VHETLIPGAG LPDIPEVGML FLLDEGLDTL 910 920 930 940 950 960 SWYGRGPHDN YWDRKTGAKI GRYEGKVADQ FVPYLRPQEC GNKTDVRFAL LTGESGGDGL 970 980 990 1000 1010 1020 EFESSSLMEV CALPWTPEEL EGSDHAYKLP PSDKTVLRIN YKQMGVGGDD SWGAPIHEEF 1030 1040 TLPSNRTYSF GFTMGAARRP TR

References

[1]

"Complete sequence of Geobacillus sp. Y412MC10." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Brumm P., Mead D. Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Y412MC10.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001793 Genomic DNA. Translation: ACX63067.1.
RefSeq	YP_003240874.1. NC_013406.1.
3D structure databases
ProteinModelPortal	D3EDU4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACX63067; ACX63067; GYMC10_0767.
GeneID	8514928.
KEGG	gym:GYMC10_0767.
PATRIC	32150079. VBIGeoSp56627_0774.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000252444.
KO	K01190.
OMA	TIREYHI.
Enzyme and pathway databases
BioCyc	PSP481743:GH8K-791-MONOMER.
Family and domain databases
Gene3D	2.60.40.320. 2 hits. 2.70.98.10. 1 hit. 3.20.20.80. 1 hit.
InterPro	IPR004199. B-gal_small/dom_5. IPR011013. Gal_mutarotase_SF_dom. IPR008979. Galactose-bd-like. IPR014718. Glyco_hydro-type_carb-bd_sub. IPR006101. Glyco_hydro_2. IPR013812. Glyco_hydro_2/20_Ig-like. IPR023232. Glyco_hydro_2_AS. IPR023230. Glyco_hydro_2_CS. IPR006102. Glyco_hydro_2_Ig-like. IPR006104. Glyco_hydro_2_N. IPR006103. Glyco_hydro_2_TIM. IPR013781. Glyco_hydro_catalytic_dom. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Pfam	PF02929. Bgal_small_N. 1 hit. PF00703. Glyco_hydro_2. 1 hit. PF02836. Glyco_hydro_2_C. 1 hit. PF02837. Glyco_hydro_2_N. 1 hit. [Graphical view]
PRINTS	PR00132. GLHYDRLASE2.
SMART	SM01038. Bgal_small_N. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF74650. Gal_mut_like. 1 hit. SSF49303. Glyco_hydro_2Ig. 2 hits. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00719. GLYCOSYL_HYDROL_F2_1. 1 hit. PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D3EDU4_GEOS4

Accession

Primary (citable) accession number: D3EDU4

Entry history

Integrated into UniProtKB/TrEMBL:	March 23, 2010
Last sequence update:	March 23, 2010
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)