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D3EDU4 (D3EDU4_GEOS4) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.23 EMBL ACX63067.1
Gene names
Ordered Locus Names:GYMC10_0767 EMBL ACX63067.1
OrganismGeobacillus sp. (strain Y412MC10) [Complete proteome] [HAMAP] EMBL ACX63067.1
Taxonomic identifier481743 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus

Protein attributes

Sequence length1042 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. SAAS SAAS014718

Ontologies

Sequences

Sequence LengthMass (Da)Tools
D3EDU4 [UniParc].

Last modified March 23, 2010. Version 1.
Checksum: 58782DA248888E68

FASTA1,042119,139
        10         20         30         40         50         60 
MRTKFIYQAP ANGYPEWNNN PNIFQLNRHK AHAYMMNFPT ESEALSLDHA MSPWYQSLNG 

        70         80         90        100        110        120 
TWKFAFAKTP EERIQNFYEA DYDSESWADL PVPSHWQLQG YDYPQYTNVR YPWAESEPEL 

       130        140        150        160        170        180 
KAPFAPTRYN PVGSYIREFT VPDTWKEQPV YISFQGVESA FYVWVNGEMV GYSEDTFTPA 

       190        200        210        220        230        240 
EFDLTPYLVE GKNKLAVEVY RWCDASWLED QDFWRLSGIF REVYLYSVPA VHISDFFVRP 

       250        260        270        280        290        300 
VLDDEYRHAE LQIDAAVTNY YNETIDKDTL QLEALLYDQD RQLVQKQTLT IADYIIDEGS 

       310        320        330        340        350        360 
FTLSMNVPEP EKWSAESPYL YTVVLALKNT DGACRGAVSC RTGFRRFELK DGLMRINGQR 

       370        380        390        400        410        420 
ILFKGVNRHE FSPDTGRALS REDMITDIEL MKTHNINAVR TSHYPNQSVW YDLCDEYGLY 

       430        440        450        460        470        480 
VIDETNLETH GTWRYGQQEL EETVPGSKLE WRDNVLDRCN SMFQRDKNHP SVIIWSLGNE 

       490        500        510        520        530        540 
SFGGDNFIAM HDFLKEADPS RLVHYEGIFH YRASEAASDM ESTMYARPQD VEKYANSNPD 

       550        560        570        580        590        600 
KPYIICEYSH AMGNSCGGLH LYWELFEKYD ILQGAFIWDW IDQAILTQTA DGIPYLAYGG 

       610        620        630        640        650        660 
DFNETPHDGN FSGNGLIFAD RTKTPKLDEV KKCYQNVKFE SLDPAASRIR VSNRFLFTSL 

       670        680        690        700        710        720 
DSYLVQWDVT LNGKVSQSGT LELSLQPGEQ AEIHVPYSPV EDEGKEAILT VSLVRKESTK 

       730        740        750        760        770        780 
WAPAGHEEAW EQFVLTPYIA EQPETDALAN VQALEAAESD EELIIRGSAV SLRFRLGTGD 

       790        800        810        820        830        840 
LTSYALSGRE CLLAPARPNF WRAVTDNDLG NRLPERSGVW RTAHDRRKLL SLRWHAEGPA 

       850        860        870        880        890        900 
VVVSSHYRIE TNPVSSLTLE YRIYPDGTVR VHETLIPGAG LPDIPEVGML FLLDEGLDTL 

       910        920        930        940        950        960 
SWYGRGPHDN YWDRKTGAKI GRYEGKVADQ FVPYLRPQEC GNKTDVRFAL LTGESGGDGL 

       970        980        990       1000       1010       1020 
EFESSSLMEV CALPWTPEEL EGSDHAYKLP PSDKTVLRIN YKQMGVGGDD SWGAPIHEEF 

      1030       1040 
TLPSNRTYSF GFTMGAARRP TR 

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References

[1]"Complete sequence of Geobacillus sp. Y412MC10."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Brumm P., Mead D.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Y412MC10.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001793 Genomic DNA. Translation: ACX63067.1.
RefSeqYP_003240874.1. NC_013406.1.

3D structure databases

ProteinModelPortalD3EDU4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX63067; ACX63067; GYMC10_0767.
GeneID8514928.
KEGGgym:GYMC10_0767.
PATRIC32150079. VBIGeoSp56627_0774.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000252444.
KOK01190.
OMADNFIAMH.
OrthoDBEOG6XWV0T.

Enzyme and pathway databases

BioCycPSP481743:GH8K-791-MONOMER.

Family and domain databases

Gene3D2.60.120.260. 1 hit.
2.60.40.320. 2 hits.
2.70.98.10. 1 hit.
3.20.20.80. 1 hit.
InterProIPR004199. B-gal_small/dom_5.
IPR011013. Gal_mutarotase_SF_dom.
IPR008979. Galactose-bd-like.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR023232. Glyco_hydro_2_AS.
IPR023230. Glyco_hydro_2_CS.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF02929. Bgal_small_N. 1 hit.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSPR00132. GLHYDRLASE2.
SMARTSM01038. Bgal_small_N. 1 hit.
[Graphical view]
SUPFAMSSF49303. SSF49303. 2 hits.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
SSF74650. SSF74650. 1 hit.
PROSITEPS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD3EDU4_GEOS4
AccessionPrimary (citable) accession number: D3EDU4
Entry history
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: May 14, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)