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D3ECS8

- D3ECS8_GEOS4

UniProt

D3ECS8 - D3ECS8_GEOS4

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

GYMC10_0669

Organism
Geobacillus sp. (strain Y412MC10)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPSP481743:GH8K-693-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:GYMC10_0669Imported
OrganismiGeobacillus sp. (strain Y412MC10)Imported
Taxonomic identifieri481743 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000002381: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD3ECS8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000049932.
KOiK01971.
OMAiLYTRHNN.
OrthoDBiEOG6F2971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ECS8-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MFIDPMLLAT APVPFSDSRF IFEPKIDGHR LIFSQQNGVV RLYTRHNNDC
60 70 80 90 100
THQYPEIANA LFPHDIVLDG EIACVDSATG NPDFETVMTR FQAKKTDKIA
110 120 130 140 150
ALSVSKPVTF VIFDVLQNNG VDLRRLPLLK RKEILSSIPL PSNNFGIIPF
160 170 180 190 200
IEGAGEALFT QIEEREMERI VGKRKESIYE TGRRSDNWRK IINWLYADVF
210 220 230 240 250
IIGYRKEEFG WLAAVPTLDN AKMRPAGIIE LGANPTHKKA FYNVVKPLVT
260 270 280
GEDRNFVYVE PRIRARVKMR NWTRSGMLRT PVFERFII
Length:288
Mass (Da):33,058
Last modified:March 23, 2010 - v1
Checksum:i8586887B9FFBA275
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001793 Genomic DNA. Translation: ACX62971.1.
RefSeqiWP_012818858.1. NC_013406.1.
YP_003240778.1. NC_013406.1.

Genome annotation databases

EnsemblBacteriaiACX62971; ACX62971; GYMC10_0669.
GeneIDi8514830.
KEGGigym:GYMC10_0669.
PATRICi32149887. VBIGeoSp56627_0678.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001793 Genomic DNA. Translation: ACX62971.1 .
RefSeqi WP_012818858.1. NC_013406.1.
YP_003240778.1. NC_013406.1.

3D structure databases

ProteinModelPortali D3ECS8.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACX62971 ; ACX62971 ; GYMC10_0669 .
GeneIDi 8514830.
KEGGi gym:GYMC10_0669.
PATRICi 32149887. VBIGeoSp56627_0678.

Phylogenomic databases

HOGENOMi HOG000049932.
KOi K01971.
OMAi LYTRHNN.
OrthoDBi EOG6F2971.

Enzyme and pathway databases

BioCyci PSP481743:GH8K-693-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Geobacillus sp. Y412MC10."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Brumm P., Mead D.
    Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y412MC10Imported.

Entry informationi

Entry nameiD3ECS8_GEOS4
AccessioniPrimary (citable) accession number: D3ECS8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: October 1, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3