D3EAJ1 (D3EAJ1_GEOS4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator, LysR family EMBL ACX62723.1

Gene names

Ordered Locus Names:

GYMC10_0419

Organism

Geobacillus sp. (strain Y412MC10) [Complete proteome] [HAMAP] EMBL ACX62723.1

Taxonomic identifier

481743 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Paenibacillaceae › Paenibacillus

Protein attributes

Sequence length	285 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH lysR-type DNA-binding domain. RuleBase RU000709 SAAS SAAS005119

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000709 SAAS SAAS005119
Ligand	DNA-binding RuleBase RU000709 SAAS SAAS005119
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3EAJ1 [UniParc]. Last modified March 23, 2010. Version 1. Checksum: CB4FC6F2F8D3BA37	FASTA	285	32,071
	10 20 30 40 50 60 MESGDLKIFQ AVAREGNITK AAASLGYVQS NVTARIRQLE SELNTPLFYR LSRGVALTTA 70 80 90 100 110 120 GCNLLKYADQ ITRLLDEAVK STQFSEEPTG PLRIGSSETT AAVHLPGIML DYHKRYPNVK 130 140 150 160 170 180 LSLITGHRAD LIRALNEYEL DGAFISGPLD YPDFNEIRAF DEELVLISEP TEAALRDLLT 190 200 210 220 230 240 KPLLFFGRGC YHRKRLEQWL HEENVGPMNI MEFGTLEAIM GGVAAGLGIS LLTRSSVQDW 250 260 270 280 VDAGKLQAFQ IPKRYRSSKV HFVFRRDLFR TSAFNHFIKP FEKTE

References

[1]

"Complete sequence of Geobacillus sp. Y412MC10." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Brumm P., Mead D. Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Y412MC10.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001793 Genomic DNA. Translation: ACX62723.1.
RefSeq	YP_003240530.1. NC_013406.1.
3D structure databases
ProteinModelPortal	D3EAJ1.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACX62723; ACX62723; GYMC10_0419.
GeneID	8514579.
KEGG	gym:GYMC10_0419.
PATRIC	32149367. VBIGeoSp56627_0419.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000233521.
OMA	FHKENAN.
Enzyme and pathway databases
BioCyc	PSP481743:GH8K-442-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR005119. LysR_subst-bd. IPR000847. Tscrpt_reg_HTH_LysR. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00126. HTH_1. 1 hit. PF03466. LysR_substrate. 1 hit. [Graphical view]
PRINTS	PR00039. HTHLYSR.
PROSITE	PS50931. HTH_LYSR. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D3EAJ1_GEOS4

Accession

Primary (citable) accession number: D3EAJ1

Entry history

Integrated into UniProtKB/TrEMBL:	March 23, 2010
Last sequence update:	March 23, 2010
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)