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D3E5B2

- D3E5B2_GEOS4

UniProt

D3E5B2 - D3E5B2_GEOS4

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Protein
L-fucose isomerase
Gene
fucI, GYMC10_3924
Organism
Geobacillus sp. (strain Y412MC10)
Status
Unreviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Converts the aldose L-fucose into the corresponding ketose L-fuculose By similarity.UniRule annotation

Catalytic activityi

L-fucopyranose = L-fuculose.UniRule annotationSAAS annotations

Cofactori

Manganese By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei344 – 3441Proton acceptor By similarityUniRule annotation
Metal bindingi344 – 3441Manganese By similarityUniRule annotation
Active sitei368 – 3681Proton acceptor By similarityUniRule annotation
Metal bindingi368 – 3681Manganese By similarityUniRule annotation
Metal bindingi534 – 5341Manganese By similarityUniRule annotation

GO - Molecular functioni

  1. L-fucose isomerase activity Source: UniProtKB-HAMAP
  2. manganese ion binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. L-fucose catabolic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbohydrate metabolism, Fucose metabolismUniRule annotationSAAS annotations

Keywords - Ligandi

ManganeseUniRule annotationSAAS annotations, Metal-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciPSP481743:GH8K-3971-MONOMER.
UniPathwayiUPA00563; UER00624.

Names & Taxonomyi

Protein namesi
Recommended name:
L-fucose isomeraseUniRule annotation (EC:5.3.1.25UniRule annotation)
Short name:
FucIaseUniRule annotation
Alternative name(s):
6-deoxy-L-galactose isomerase
Gene namesi
Name:fucIUniRule annotation
Ordered Locus Names:GYMC10_3924Imported
OrganismiGeobacillus sp. (strain Y412MC10)Imported
Taxonomic identifieri481743 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000002381: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Structurei

3D structure databases

ProteinModelPortaliD3E5B2.

Family & Domainsi

Sequence similaritiesi

Belongs to the L-fucose isomerase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000249674.
KOiK01818.
OMAiYWSPESV.
OrthoDBiEOG6FJNCF.

Family and domain databases

Gene3Di3.20.14.10. 1 hit.
3.40.275.10. 1 hit.
3.40.50.1070. 1 hit.
HAMAPiMF_01254. Fucose_iso.
InterProiIPR004216. Fuc/Ara_isomerase_C.
IPR015888. Fuc_isomerase_C.
IPR012888. Fucose_iso_N1.
IPR005763. Fucose_isomerase.
IPR009015. Fucose_isomerase_N/cen.
IPR012889. Fucose_isomerase_N2.
[Graphical view]
PfamiPF02952. Fucose_iso_C. 1 hit.
PF07881. Fucose_iso_N1. 1 hit.
PF07882. Fucose_iso_N2. 1 hit.
[Graphical view]
SUPFAMiSSF50443. SSF50443. 1 hit.
SSF53743. SSF53743. 1 hit.
TIGRFAMsiTIGR01089. fucI. 1 hit.

Sequencei

Sequence statusi: Complete.

D3E5B2-1 [UniParc]FASTAAdd to Basket

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MTIENDYRWR DGFPKIGIRP TIDGRRRGVR ESLEEQTMNL AKAVAEMLTK    50
ELKYPNGEPV ECVIADTCIG GVAEATAAAK KFKNAEVGLT ITVTPCWCYG 100
TETMDADPSR PKAVWGFNGT GRPGAVYLAA VLSAHAQKGL PAFGIYGEDV 150
QDEGDTRIPD DVQEKLLRFA RSGLAAAYMR GQSYLSMGSV SMGIAGSIVD 200
DSFFQEYLGM RNEYVDMSEF TRRLEEGIYD PEEYEKALAW VKENCTEGPD 250
NNPDHLQNSR ERKDLEWETV VKMTLITRDL MIGNPRLKEL GFEEEAQGHS 300
AIASGFQGQR QWTDHSPNGD FLETILNSSF DWNGRRSPYI VATENDSLNG 350
VGMLFGYLLT NTAQIFADVR TYWSPASVER VTGYKLEGKA ENGILHLINS 400
GSAALDGTGE QELDGKPAMK PFWDITDEEV DRTLKATQWR PANLEYFRGG 450
GYSTDYLTRG GMPMTMFRLN LVKGLGPVLQ IAEGYSVDLP SEVHDTLDKR 500
TDPTWPTTWF VPNLTGEGAF SSVYEVMNQW GANHGVISYG HIGADLITLA 550
SVLRIPVNMH NVPANEVFRP RAWGMFGTSD PESADFRACQ NFGPLYK 597
Length:597
Mass (Da):66,324
Last modified:March 23, 2010 - v1
Checksum:i153F52302413B30B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001793 Genomic DNA. Translation: ACX66153.1.
RefSeqiYP_003243960.1. NC_013406.1.

Genome annotation databases

EnsemblBacteriaiACX66153; ACX66153; GYMC10_3924.
GeneIDi8518108.
KEGGigym:GYMC10_3924.
PATRICi32156367. VBIGeoSp56627_3895.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001793 Genomic DNA. Translation: ACX66153.1 .
RefSeqi YP_003243960.1. NC_013406.1.

3D structure databases

ProteinModelPortali D3E5B2.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACX66153 ; ACX66153 ; GYMC10_3924 .
GeneIDi 8518108.
KEGGi gym:GYMC10_3924.
PATRICi 32156367. VBIGeoSp56627_3895.

Phylogenomic databases

HOGENOMi HOG000249674.
KOi K01818.
OMAi YWSPESV.
OrthoDBi EOG6FJNCF.

Enzyme and pathway databases

UniPathwayi UPA00563 ; UER00624 .
BioCyci PSP481743:GH8K-3971-MONOMER.

Family and domain databases

Gene3Di 3.20.14.10. 1 hit.
3.40.275.10. 1 hit.
3.40.50.1070. 1 hit.
HAMAPi MF_01254. Fucose_iso.
InterProi IPR004216. Fuc/Ara_isomerase_C.
IPR015888. Fuc_isomerase_C.
IPR012888. Fucose_iso_N1.
IPR005763. Fucose_isomerase.
IPR009015. Fucose_isomerase_N/cen.
IPR012889. Fucose_isomerase_N2.
[Graphical view ]
Pfami PF02952. Fucose_iso_C. 1 hit.
PF07881. Fucose_iso_N1. 1 hit.
PF07882. Fucose_iso_N2. 1 hit.
[Graphical view ]
SUPFAMi SSF50443. SSF50443. 1 hit.
SSF53743. SSF53743. 1 hit.
TIGRFAMsi TIGR01089. fucI. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Geobacillus sp. Y412MC10."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Brumm P., Mead D.
    Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y412MC10.

Entry informationi

Entry nameiD3E5B2_GEOS4
AccessioniPrimary (citable) accession number: D3E5B2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: June 11, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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