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Protein
Submitted name:

RNA binding protein S1

Gene

RNPS1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
RNA binding protein S1Imported
Submitted name:
RNA binding protein S1, serine-rich domain, isoform CRA_aImported
Gene namesi
Name:RNPS1Imported
Synonyms:rnps1Imported
ORF Names:hCG_1989969Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSG00000205937.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
CLK2P497605EBI-10176640,EBI-750020
HEXIM2Q96MH23EBI-10176640,EBI-5460660
SDCBP2Q9H1903EBI-10176640,EBI-742426
SRPK2P783623EBI-10176640,EBI-593303
TRIM41Q8WV443EBI-10176640,EBI-725997
U2AF1Q01081-23EBI-10176640,EBI-10176676
ZBTB14O438293EBI-10176640,EBI-10176632
ZNF473Q8WTR73EBI-10176640,EBI-751409

Protein-protein interaction databases

STRINGi9606.ENSP00000301730.

Structurei

3D structure databases

SMRiD3DU92. Positions 157-244.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini161 – 24080RRM (RNA recognition motif)InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG4209. Eukaryota.
ENOG4111PFV. LUCA.
KOiK14325.
OMAiPTKVHLG.
OrthoDBiEOG091G14LV.
PhylomeDBiD3DU92.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF00076. RRM_1. 1 hit.
[Graphical view]
SMARTiSM00360. RRM. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiPS50102. RRM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3DU92-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLSGVKKKS LLGVKENNKK SSTRAPSPTK RKDRSDEKSK DRSKDKGATK
60 70 80 90 100
ESSEKDRGRD KTRKRRSASS GSSSTRSRSS STSSSGSSTS TGSSSGSSSS
110 120 130 140 150
SASSRSGSSS TSRSSSSSSS SGSPSPSRRR HDNRRRSRSK SKPPKRDEKE
160 170 180 190 200
RKRRSPSPKP TKVHIGRLTR NVTKDHIMEI FSTYGKIKMI DMPVERMHPH
210 220 230 240 250
LSKGYAYVEF ENPDEAEKAL KHMDGGQIDG QEITATAVLA PWPRPPPRRF
260 270 280 290 300
SPPRRMLPPP PMWRRSPPRM RRRSRSPRRR SPVRRRSRSP GRRRHRSRSS

SNSSR
Length:305
Mass (Da):34,208
Last modified:March 23, 2010 - v1
Checksum:i930C9D36C2486144
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB445101 mRNA. Translation: BAI99736.1.
CH471112 Genomic DNA. Translation: EAW85517.1.
CH471112 Genomic DNA. Translation: EAW85520.1.
CH471112 Genomic DNA. Translation: EAW85522.1.
RefSeqiNP_001273554.1. NM_001286625.1.
NP_006702.1. NM_006711.4.
NP_542161.1. NM_080594.3.
XP_005255105.1. XM_005255048.1.
XP_005255106.1. XM_005255049.3.
UniGeneiHs.355643.
Hs.507343.
Hs.733012.

Genome annotation databases

GeneIDi10921.
KEGGihsa:10921.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB445101 mRNA. Translation: BAI99736.1.
CH471112 Genomic DNA. Translation: EAW85517.1.
CH471112 Genomic DNA. Translation: EAW85520.1.
CH471112 Genomic DNA. Translation: EAW85522.1.
RefSeqiNP_001273554.1. NM_001286625.1.
NP_006702.1. NM_006711.4.
NP_542161.1. NM_080594.3.
XP_005255105.1. XM_005255048.1.
XP_005255106.1. XM_005255049.3.
UniGeneiHs.355643.
Hs.507343.
Hs.733012.

3D structure databases

SMRiD3DU92. Positions 157-244.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000301730.

Protocols and materials databases

DNASUi10921.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10921.
KEGGihsa:10921.

Organism-specific databases

CTDi10921.

Phylogenomic databases

eggNOGiKOG4209. Eukaryota.
ENOG4111PFV. LUCA.
KOiK14325.
OMAiPTKVHLG.
OrthoDBiEOG091G14LV.
PhylomeDBiD3DU92.

Miscellaneous databases

ChiTaRSiRNPS1. human.
GenomeRNAii10921.

Gene expression databases

BgeeiENSG00000205937.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF00076. RRM_1. 1 hit.
[Graphical view]
SMARTiSM00360. RRM. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiPS50102. RRM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiD3DU92_HUMAN
AccessioniPrimary (citable) accession number: D3DU92
Entry historyi
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: September 7, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.