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D3DPU8 (D3DPU8_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:COL9A2 EMBL EAX07226.1
ORF Names:hCG_15675 EMBL EAX07226.1
OrganismHomo sapiens (Human) EMBL EAX07226.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length595 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   DomainCollagen EMBL EAX07226.1
Gene Ontology (GO)
   Cellular_componentcollagen trimer

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D3DPU8 [UniParc].

Last modified March 23, 2010. Version 1.
Checksum: 82053A2D9439E498

FASTA59556,360
        10         20         30         40         50         60 
MGIPGVKGQP GLPGPPGLPG PGFAGPPGPP GPVGLPGEIG IRGPKGDPGP DGPSGPPGPP 

        70         80         90        100        110        120 
GKPGRPGTIQ GLEGSADFLC PTNCPPGMKG PPGLQGVKGH AGKRGILGDP GHQGKPGPKG 

       130        140        150        160        170        180 
DVGASGEQGI PGPPGPQGIR GYPGMAGPKG ETGPHGYKGM VGAIGATGPP GEEGPRGPPG 

       190        200        210        220        230        240 
RAGEKGDEGS PGIRGPQGIT GPKGATGPPG INGKDGTPGT PGMKGSAGQA GQPGSPGHQG 

       250        260        270        280        290        300 
LAGVPGQPGT KGGPGDQGEP GPQGLPGFSG PPGKEGEPGP RGEIGPQGIM GQKGDQGERG 

       310        320        330        340        350        360 
PVGQPGPQGR QGPKGEQGPP GIPGPQGLPG VKGDKGSPGK TGPRGKVGDP GVAGLPGEKG 

       370        380        390        400        410        420 
EKGESGEPGP KGQQGVRGEP GYPGPSGDAG APGVQGYPGP PGPRGLAGNR GVPGQPGRQG 

       430        440        450        460        470        480 
VEGRDATDQH IVDVALKMLQ EQLAEVAVSA KREALGAVGM MGPPGPPGPP GYPGKQGPHG 

       490        500        510        520        530        540 
HPGPRGVPGI VGAVGQIGNT GPKGKRGEKG DPGEVGRGHP GMPGPPGIPG LPGRPGQAIN 

       550        560        570        580        590 
GKDGDRGSPG APGEAGRPGL PGPVGLPGFC EPAACLGASA YASARLTEPG SIKGP 

« Hide

References

« Hide 'large scale' references
[1]"The sequence of the human genome."
Venter J.C., Adams M.D., Myers E.W., Li P.W., Mural R.J., Sutton G.G., Smith H.O., Yandell M., Evans C.A., Holt R.A., Gocayne J.D., Amanatides P., Ballew R.M., Huson D.H., Wortman J.R., Zhang Q., Kodira C.D., Zheng X.H. expand/collapse author list , Chen L., Skupski M., Subramanian G., Thomas P.D., Zhang J., Gabor Miklos G.L., Nelson C., Broder S., Clark A.G., Nadeau J., McKusick V.A., Zinder N., Levine A.J., Roberts R.J., Simon M., Slayman C., Hunkapiller M., Bolanos R., Delcher A., Dew I., Fasulo D., Flanigan M., Florea L., Halpern A., Hannenhalli S., Kravitz S., Levy S., Mobarry C., Reinert K., Remington K., Abu-Threideh J., Beasley E., Biddick K., Bonazzi V., Brandon R., Cargill M., Chandramouliswaran I., Charlab R., Chaturvedi K., Deng Z., Di Francesco V., Dunn P., Eilbeck K., Evangelista C., Gabrielian A.E., Gan W., Ge W., Gong F., Gu Z., Guan P., Heiman T.J., Higgins M.E., Ji R.R., Ke Z., Ketchum K.A., Lai Z., Lei Y., Li Z., Li J., Liang Y., Lin X., Lu F., Merkulov G.V., Milshina N., Moore H.M., Naik A.K., Narayan V.A., Neelam B., Nusskern D., Rusch D.B., Salzberg S., Shao W., Shue B., Sun J., Wang Z., Wang A., Wang X., Wang J., Wei M., Wides R., Xiao C., Yan C., Yao A., Ye J., Zhan M., Zhang W., Zhang H., Zhao Q., Zheng L., Zhong F., Zhong W., Zhu S., Zhao S., Gilbert D., Baumhueter S., Spier G., Carter C., Cravchik A., Woodage T., Ali F., An H., Awe A., Baldwin D., Baden H., Barnstead M., Barrow I., Beeson K., Busam D., Carver A., Center A., Cheng M.L., Curry L., Danaher S., Davenport L., Desilets R., Dietz S., Dodson K., Doup L., Ferriera S., Garg N., Gluecksmann A., Hart B., Haynes J., Haynes C., Heiner C., Hladun S., Hostin D., Houck J., Howland T., Ibegwam C., Johnson J., Kalush F., Kline L., Koduru S., Love A., Mann F., May D., McCawley S., McIntosh T., McMullen I., Moy M., Moy L., Murphy B., Nelson K., Pfannkoch C., Pratts E., Puri V., Qureshi H., Reardon M., Rodriguez R., Rogers Y.H., Romblad D., Ruhfel B., Scott R., Sitter C., Smallwood M., Stewart E., Strong R., Suh E., Thomas R., Tint N.N., Tse S., Vech C., Wang G., Wetter J., Williams S., Williams M., Windsor S., Winn-Deen E., Wolfe K., Zaveri J., Zaveri K., Abril J.F., Guigo R., Campbell M.J., Sjolander K.V., Karlak B., Kejariwal A., Mi H., Lazareva B., Hatton T., Narechania A., Diemer K., Muruganujan A., Guo N., Sato S., Bafna V., Istrail S., Lippert R., Schwartz R., Walenz B., Yooseph S., Allen D., Basu A., Baxendale J., Blick L., Caminha M., Carnes-Stine J., Caulk P., Chiang Y.H., Coyne M., Dahlke C., Mays A., Dombroski M., Donnelly M., Ely D., Esparham S., Fosler C., Gire H., Glanowski S., Glasser K., Glodek A., Gorokhov M., Graham K., Gropman B., Harris M., Heil J., Henderson S., Hoover J., Jennings D., Jordan C., Jordan J., Kasha J., Kagan L., Kraft C., Levitsky A., Lewis M., Liu X., Lopez J., Ma D., Majoros W., McDaniel J., Murphy S., Newman M., Nguyen T., Nguyen N., Nodell M., Pan S., Peck J., Peterson M., Rowe W., Sanders R., Scott J., Simpson M., Smith T., Sprague A., Stockwell T., Turner R., Venter E., Wang M., Wen M., Wu D., Wu M., Xia A., Zandieh A., Zhu X.
Science 291:1304-1351(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. expand/collapse author list , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CH471059 Genomic DNA. Translation: EAX07224.1.
CH471059 Genomic DNA. Translation: EAX07226.1.
CH471059 Genomic DNA. Translation: EAX07228.1.
CH471059 Genomic DNA. Translation: EAX07230.1.
CH471059 Genomic DNA. Translation: EAX07232.1.
RefSeqXP_005270537.1. XM_005270480.1.
UniGeneHs.418012.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1298.
KEGGhsa:1298.

Organism-specific databases

CTD1298.

Phylogenomic databases

KOK08131.

Family and domain databases

InterProIPR008160. Collagen.
[Graphical view]
PfamPF01391. Collagen. 10 hits.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi1298.
NextBio35489850.

Entry information

Entry nameD3DPU8_HUMAN
AccessionPrimary (citable) accession number: D3DPU8
Entry history
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: July 9, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.