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D3DPU8

- D3DPU8_HUMAN

UniProt

D3DPU8 - D3DPU8_HUMAN

Protein
Submitted name:

Collagen, type IX, alpha 2, isoform CRA_a

Gene

COL9A2

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (23 Mar 2010)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Collagen, type IX, alpha 2, isoform CRA_aImported
    Gene namesi
    Name:COL9A2Imported
    ORF Names:hCG_15675Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    Subcellular locationi

    GO - Cellular componenti

    1. collagen trimer Source: UniProtKB-KW

    Family & Domainsi

    Keywords - Domaini

    CollagenImported

    Phylogenomic databases

    KOiK08131.

    Family and domain databases

    InterProiIPR008160. Collagen.
    [Graphical view]
    PfamiPF01391. Collagen. 10 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3DPU8-1 [UniParc]FASTAAdd to Basket

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    MGIPGVKGQP GLPGPPGLPG PGFAGPPGPP GPVGLPGEIG IRGPKGDPGP    50
    DGPSGPPGPP GKPGRPGTIQ GLEGSADFLC PTNCPPGMKG PPGLQGVKGH 100
    AGKRGILGDP GHQGKPGPKG DVGASGEQGI PGPPGPQGIR GYPGMAGPKG 150
    ETGPHGYKGM VGAIGATGPP GEEGPRGPPG RAGEKGDEGS PGIRGPQGIT 200
    GPKGATGPPG INGKDGTPGT PGMKGSAGQA GQPGSPGHQG LAGVPGQPGT 250
    KGGPGDQGEP GPQGLPGFSG PPGKEGEPGP RGEIGPQGIM GQKGDQGERG 300
    PVGQPGPQGR QGPKGEQGPP GIPGPQGLPG VKGDKGSPGK TGPRGKVGDP 350
    GVAGLPGEKG EKGESGEPGP KGQQGVRGEP GYPGPSGDAG APGVQGYPGP 400
    PGPRGLAGNR GVPGQPGRQG VEGRDATDQH IVDVALKMLQ EQLAEVAVSA 450
    KREALGAVGM MGPPGPPGPP GYPGKQGPHG HPGPRGVPGI VGAVGQIGNT 500
    GPKGKRGEKG DPGEVGRGHP GMPGPPGIPG LPGRPGQAIN GKDGDRGSPG 550
    APGEAGRPGL PGPVGLPGFC EPAACLGASA YASARLTEPG SIKGP 595
    Length:595
    Mass (Da):56,360
    Last modified:March 23, 2010 - v1
    Checksum:i82053A2D9439E498
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH471059 Genomic DNA. Translation: EAX07224.1.
    CH471059 Genomic DNA. Translation: EAX07226.1.
    CH471059 Genomic DNA. Translation: EAX07228.1.
    CH471059 Genomic DNA. Translation: EAX07230.1.
    CH471059 Genomic DNA. Translation: EAX07232.1.
    RefSeqiXP_005270537.1. XM_005270480.1.
    UniGeneiHs.418012.

    Genome annotation databases

    GeneIDi1298.
    KEGGihsa:1298.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH471059 Genomic DNA. Translation: EAX07224.1 .
    CH471059 Genomic DNA. Translation: EAX07226.1 .
    CH471059 Genomic DNA. Translation: EAX07228.1 .
    CH471059 Genomic DNA. Translation: EAX07230.1 .
    CH471059 Genomic DNA. Translation: EAX07232.1 .
    RefSeqi XP_005270537.1. XM_005270480.1.
    UniGenei Hs.418012.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 1298.
    KEGGi hsa:1298.

    Organism-specific databases

    CTDi 1298.

    Phylogenomic databases

    KOi K08131.

    Miscellaneous databases

    GenomeRNAii 1298.
    NextBioi 35489850.

    Family and domain databases

    InterProi IPR008160. Collagen.
    [Graphical view ]
    Pfami PF01391. Collagen. 10 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The sequence of the human genome."
      Venter J.C., Adams M.D., Myers E.W., Li P.W., Mural R.J., Sutton G.G., Smith H.O., Yandell M., Evans C.A., Holt R.A., Gocayne J.D., Amanatides P., Ballew R.M., Huson D.H., Wortman J.R., Zhang Q., Kodira C.D., Zheng X.H.
      , Chen L., Skupski M., Subramanian G., Thomas P.D., Zhang J., Gabor Miklos G.L., Nelson C., Broder S., Clark A.G., Nadeau J., McKusick V.A., Zinder N., Levine A.J., Roberts R.J., Simon M., Slayman C., Hunkapiller M., Bolanos R., Delcher A., Dew I., Fasulo D., Flanigan M., Florea L., Halpern A., Hannenhalli S., Kravitz S., Levy S., Mobarry C., Reinert K., Remington K., Abu-Threideh J., Beasley E., Biddick K., Bonazzi V., Brandon R., Cargill M., Chandramouliswaran I., Charlab R., Chaturvedi K., Deng Z., Di Francesco V., Dunn P., Eilbeck K., Evangelista C., Gabrielian A.E., Gan W., Ge W., Gong F., Gu Z., Guan P., Heiman T.J., Higgins M.E., Ji R.R., Ke Z., Ketchum K.A., Lai Z., Lei Y., Li Z., Li J., Liang Y., Lin X., Lu F., Merkulov G.V., Milshina N., Moore H.M., Naik A.K., Narayan V.A., Neelam B., Nusskern D., Rusch D.B., Salzberg S., Shao W., Shue B., Sun J., Wang Z., Wang A., Wang X., Wang J., Wei M., Wides R., Xiao C., Yan C., Yao A., Ye J., Zhan M., Zhang W., Zhang H., Zhao Q., Zheng L., Zhong F., Zhong W., Zhu S., Zhao S., Gilbert D., Baumhueter S., Spier G., Carter C., Cravchik A., Woodage T., Ali F., An H., Awe A., Baldwin D., Baden H., Barnstead M., Barrow I., Beeson K., Busam D., Carver A., Center A., Cheng M.L., Curry L., Danaher S., Davenport L., Desilets R., Dietz S., Dodson K., Doup L., Ferriera S., Garg N., Gluecksmann A., Hart B., Haynes J., Haynes C., Heiner C., Hladun S., Hostin D., Houck J., Howland T., Ibegwam C., Johnson J., Kalush F., Kline L., Koduru S., Love A., Mann F., May D., McCawley S., McIntosh T., McMullen I., Moy M., Moy L., Murphy B., Nelson K., Pfannkoch C., Pratts E., Puri V., Qureshi H., Reardon M., Rodriguez R., Rogers Y.H., Romblad D., Ruhfel B., Scott R., Sitter C., Smallwood M., Stewart E., Strong R., Suh E., Thomas R., Tint N.N., Tse S., Vech C., Wang G., Wetter J., Williams S., Williams M., Windsor S., Winn-Deen E., Wolfe K., Zaveri J., Zaveri K., Abril J.F., Guigo R., Campbell M.J., Sjolander K.V., Karlak B., Kejariwal A., Mi H., Lazareva B., Hatton T., Narechania A., Diemer K., Muruganujan A., Guo N., Sato S., Bafna V., Istrail S., Lippert R., Schwartz R., Walenz B., Yooseph S., Allen D., Basu A., Baxendale J., Blick L., Caminha M., Carnes-Stine J., Caulk P., Chiang Y.H., Coyne M., Dahlke C., Mays A., Dombroski M., Donnelly M., Ely D., Esparham S., Fosler C., Gire H., Glanowski S., Glasser K., Glodek A., Gorokhov M., Graham K., Gropman B., Harris M., Heil J., Henderson S., Hoover J., Jennings D., Jordan C., Jordan J., Kasha J., Kagan L., Kraft C., Levitsky A., Lewis M., Liu X., Lopez J., Ma D., Majoros W., McDaniel J., Murphy S., Newman M., Nguyen T., Nguyen N., Nodell M., Pan S., Peck J., Peterson M., Rowe W., Sanders R., Scott J., Simpson M., Smith T., Sprague A., Stockwell T., Turner R., Venter E., Wang M., Wen M., Wu D., Wu M., Xia A., Zandieh A., Zhu X.
      Science 291:1304-1351(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiD3DPU8_HUMAN
    AccessioniPrimary (citable) accession number: D3DPU8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 23, 2010
    Last sequence update: March 23, 2010
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.