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D3DJZ2

- D3DJZ2_HYDTT

UniProt

D3DJZ2 - D3DJZ2_HYDTT

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Protein
Submitted name:

Manganese/iron superoxide dismutase

Gene
sodA, HTH_1697, Hydth_1682
Organism
Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Manganese/iron superoxide dismutaseImported
Submitted name:
Superoxide dismutaseImported
Gene namesi
Name:sodAImported
Ordered Locus Names:HTH_1697Imported, Hydth_1682Imported
OrganismiHydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)
Taxonomic identifieri608538 [NCBI]
Taxonomic lineageiBacteriaAquificaeAquificalesAquificaceaeHydrogenobacter
ProteomesiUP000002574: Chromosome

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000013583.
KOiK04564.
OMAiFGSWDAC.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.

Sequencei

Sequence statusi: Complete.

D3DJZ2-1 [UniParc]FASTAAdd to Basket

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MAVHKLQPKD HLKPSDLRGI SNEQIEPHFE AHYKGYVTKY NEIQEKLADL    50
NFSDRSKANQ NYSEYRELKV EETFNYMGVI LHELYFGHLK PQGEPSEALK 100
KKVEEDFGSW DACIQEIKAA GIAFRGWAIL GLDIFSGRLV VNGLDAHNVY 150
NYTGLIPIIV LDTYEHAYYV DQKNKRPPYI DAFLQSLNWD VINERFEKAM 200
KAYEVLKDFV K 211
Length:211
Mass (Da):24,538
Last modified:March 23, 2010 - v1
Checksum:i1E5B010ECE291B03
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002221 Genomic DNA. Translation: ADO46065.1.
AP011112 Genomic DNA. Translation: BAI70144.1.
RefSeqiWP_012964324.1. NC_017161.1.
YP_003433345.1. NC_013799.1.
YP_005512358.1. NC_017161.1.

Genome annotation databases

EnsemblBacteriaiADO46065; ADO46065; Hydth_1682.
BAI70144; BAI70144; HTH_1697.
GeneIDi12101596.
8772994.
KEGGihte:Hydth_1682.
hth:HTH_1697.
PATRICi32212335. VBIHydThe36152_1702.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002221 Genomic DNA. Translation: ADO46065.1 .
AP011112 Genomic DNA. Translation: BAI70144.1 .
RefSeqi WP_012964324.1. NC_017161.1.
YP_003433345.1. NC_013799.1.
YP_005512358.1. NC_017161.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADO46065 ; ADO46065 ; Hydth_1682 .
BAI70144 ; BAI70144 ; HTH_1697 .
GeneIDi 12101596.
8772994.
KEGGi hte:Hydth_1682.
hth:HTH_1697.
PATRICi 32212335. VBIHydThe36152_1702.

Phylogenomic databases

HOGENOMi HOG000013583.
KOi K04564.
OMAi FGSWDAC.

Family and domain databases

InterProi IPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view ]
PANTHERi PTHR11404. PTHR11404. 1 hit.
Pfami PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000349. SODismutase. 1 hit.
SUPFAMi SSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the thermophilic, obligately chemolithoautotrophic hydrogen-oxidizing bacterium Hydrogenobacter thermophilus TK-6."
    Arai H., Kanbe H., Ishii M., Igarashi Y.
    J. Bacteriol. 192:2651-2652(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 6534 / IAM 12695 / TK-6 [Tokyo] and TK-6.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 6534 / IAM 12695 / TK-6 [JGI] and TK-6Imported.

Entry informationi

Entry nameiD3DJZ2_HYDTT
AccessioniPrimary (citable) accession number: D3DJZ2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: September 3, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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