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D3DJZ2

- D3DJZ2_HYDTT

UniProt

D3DJZ2 - D3DJZ2_HYDTT

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Protein
Submitted name:

Manganese/iron superoxide dismutase

Gene

sodA

Organism
Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Manganese/iron superoxide dismutaseImported
Submitted name:
Superoxide dismutaseImported
Gene namesi
Name:sodAImported
Ordered Locus Names:HTH_1697Imported, Hydth_1682Imported
OrganismiHydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)Imported
Taxonomic identifieri608538 [NCBI]
Taxonomic lineageiBacteriaAquificaeAquificalesAquificaceaeHydrogenobacter
ProteomesiUP000008982: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000013583.
KOiK04564.
OMAiFGSWDAC.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.

Sequencei

Sequence statusi: Complete.

D3DJZ2 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAVHKLQPKD HLKPSDLRGI SNEQIEPHFE AHYKGYVTKY NEIQEKLADL
60 70 80 90 100
NFSDRSKANQ NYSEYRELKV EETFNYMGVI LHELYFGHLK PQGEPSEALK
110 120 130 140 150
KKVEEDFGSW DACIQEIKAA GIAFRGWAIL GLDIFSGRLV VNGLDAHNVY
160 170 180 190 200
NYTGLIPIIV LDTYEHAYYV DQKNKRPPYI DAFLQSLNWD VINERFEKAM
210
KAYEVLKDFV K
Length:211
Mass (Da):24,538
Last modified:March 23, 2010 - v1
Checksum:i1E5B010ECE291B03
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002221 Genomic DNA. Translation: ADO46065.1.
AP011112 Genomic DNA. Translation: BAI70144.1.
RefSeqiYP_003433345.1. NC_013799.1.
YP_005512358.1. NC_017161.1.

Genome annotation databases

EnsemblBacteriaiADO46065; ADO46065; Hydth_1682.
BAI70144; BAI70144; HTH_1697.
GeneIDi12101596.
8772994.
KEGGihte:Hydth_1682.
hth:HTH_1697.
PATRICi32212335. VBIHydThe36152_1702.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002221 Genomic DNA. Translation: ADO46065.1 .
AP011112 Genomic DNA. Translation: BAI70144.1 .
RefSeqi YP_003433345.1. NC_013799.1.
YP_005512358.1. NC_017161.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADO46065 ; ADO46065 ; Hydth_1682 .
BAI70144 ; BAI70144 ; HTH_1697 .
GeneIDi 12101596.
8772994.
KEGGi hte:Hydth_1682.
hth:HTH_1697.
PATRICi 32212335. VBIHydThe36152_1702.

Phylogenomic databases

HOGENOMi HOG000013583.
KOi K04564.
OMAi FGSWDAC.

Family and domain databases

InterProi IPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view ]
PANTHERi PTHR11404. PTHR11404. 1 hit.
Pfami PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000349. SODismutase. 1 hit.
SUPFAMi SSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the thermophilic, obligately chemolithoautotrophic hydrogen-oxidizing bacterium Hydrogenobacter thermophilus TK-6."
    Arai H., Kanbe H., Ishii M., Igarashi Y.
    J. Bacteriol. 192:2651-2652(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TK-6.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 6534 / IAM 12695 / TK-6 [JGI]Imported and TK-6Imported.

Entry informationi

Entry nameiD3DJZ2_HYDTT
AccessioniPrimary (citable) accession number: D3DJZ2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: October 29, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3