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Protein
Submitted name:

Superoxide dismutase

Gene

sodA

Organism
Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutaseImported
Gene namesi
Name:sodAImported
Ordered Locus Names:HTH_1697Imported
OrganismiHydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)Imported
Taxonomic identifieri608538 [NCBI]
Taxonomic lineageiBacteriaAquificaeAquificalesAquificaceaeHydrogenobacter
ProteomesiUP000002574 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000013583.
KOiK04564.
OMAiANQNYSE.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.

Sequencei

Sequence statusi: Complete.

D3DJZ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVHKLQPKD HLKPSDLRGI SNEQIEPHFE AHYKGYVTKY NEIQEKLADL
60 70 80 90 100
NFSDRSKANQ NYSEYRELKV EETFNYMGVI LHELYFGHLK PQGEPSEALK
110 120 130 140 150
KKVEEDFGSW DACIQEIKAA GIAFRGWAIL GLDIFSGRLV VNGLDAHNVY
160 170 180 190 200
NYTGLIPIIV LDTYEHAYYV DQKNKRPPYI DAFLQSLNWD VINERFEKAM
210
KAYEVLKDFV K
Length:211
Mass (Da):24,538
Last modified:March 23, 2010 - v1
Checksum:i1E5B010ECE291B03
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP011112 Genomic DNA. Translation: BAI70144.1.
RefSeqiWP_012964324.1. NC_017161.1.
YP_003433345.1. NC_013799.1.
YP_005512358.1. NC_017161.1.

Genome annotation databases

EnsemblBacteriaiADO46065; ADO46065; Hydth_1682.
BAI70144; BAI70144; HTH_1697.
KEGGihte:Hydth_1682.
hth:HTH_1697.
PATRICi32212335. VBIHydThe36152_1702.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP011112 Genomic DNA. Translation: BAI70144.1.
RefSeqiWP_012964324.1. NC_017161.1.
YP_003433345.1. NC_013799.1.
YP_005512358.1. NC_017161.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADO46065; ADO46065; Hydth_1682.
BAI70144; BAI70144; HTH_1697.
KEGGihte:Hydth_1682.
hth:HTH_1697.
PATRICi32212335. VBIHydThe36152_1702.

Phylogenomic databases

HOGENOMiHOG000013583.
KOiK04564.
OMAiANQNYSE.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the thermophilic, obligately chemolithoautotrophic hydrogen-oxidizing bacterium Hydrogenobacter thermophilus TK-6."
    Arai H., Kanbe H., Ishii M., Igarashi Y.
    J. Bacteriol. 192:2651-2652(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 6534 / IAM 12695 / TK-6 [Tokyo]Imported.

Entry informationi

Entry nameiD3DJZ2_HYDTT
AccessioniPrimary (citable) accession number: D3DJZ2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: May 27, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.