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D3DJZ2

- D3DJZ2_HYDTT

UniProt

D3DJZ2 - D3DJZ2_HYDTT

Protein
Submitted name:

Manganese/iron superoxide dismutase

Gene

sodA

Organism
Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (23 Mar 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Manganese/iron superoxide dismutaseImported
    Submitted name:
    Superoxide dismutaseImported
    Gene namesi
    Name:sodAImported
    Ordered Locus Names:HTH_1697Imported, Hydth_1682Imported
    OrganismiHydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)Imported
    Taxonomic identifieri608538 [NCBI]
    Taxonomic lineageiBacteriaAquificaeAquificalesAquificaceaeHydrogenobacter
    ProteomesiUP000008982: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000013583.
    KOiK04564.
    OMAiFGSWDAC.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D3DJZ2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAVHKLQPKD HLKPSDLRGI SNEQIEPHFE AHYKGYVTKY NEIQEKLADL    50
    NFSDRSKANQ NYSEYRELKV EETFNYMGVI LHELYFGHLK PQGEPSEALK 100
    KKVEEDFGSW DACIQEIKAA GIAFRGWAIL GLDIFSGRLV VNGLDAHNVY 150
    NYTGLIPIIV LDTYEHAYYV DQKNKRPPYI DAFLQSLNWD VINERFEKAM 200
    KAYEVLKDFV K 211
    Length:211
    Mass (Da):24,538
    Last modified:March 23, 2010 - v1
    Checksum:i1E5B010ECE291B03
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002221 Genomic DNA. Translation: ADO46065.1.
    AP011112 Genomic DNA. Translation: BAI70144.1.
    RefSeqiWP_012964324.1. NC_017161.1.
    YP_003433345.1. NC_013799.1.
    YP_005512358.1. NC_017161.1.

    Genome annotation databases

    EnsemblBacteriaiADO46065; ADO46065; Hydth_1682.
    BAI70144; BAI70144; HTH_1697.
    GeneIDi12101596.
    8772994.
    KEGGihte:Hydth_1682.
    hth:HTH_1697.
    PATRICi32212335. VBIHydThe36152_1702.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002221 Genomic DNA. Translation: ADO46065.1 .
    AP011112 Genomic DNA. Translation: BAI70144.1 .
    RefSeqi WP_012964324.1. NC_017161.1.
    YP_003433345.1. NC_013799.1.
    YP_005512358.1. NC_017161.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADO46065 ; ADO46065 ; Hydth_1682 .
    BAI70144 ; BAI70144 ; HTH_1697 .
    GeneIDi 12101596.
    8772994.
    KEGGi hte:Hydth_1682.
    hth:HTH_1697.
    PATRICi 32212335. VBIHydThe36152_1702.

    Phylogenomic databases

    HOGENOMi HOG000013583.
    KOi K04564.
    OMAi FGSWDAC.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the thermophilic, obligately chemolithoautotrophic hydrogen-oxidizing bacterium Hydrogenobacter thermophilus TK-6."
      Arai H., Kanbe H., Ishii M., Igarashi Y.
      J. Bacteriol. 192:2651-2652(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TK-6.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 6534 / IAM 12695 / TK-6 [JGI]Imported and TK-6Imported.

    Entry informationi

    Entry nameiD3DJZ2_HYDTT
    AccessioniPrimary (citable) accession number: D3DJZ2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 23, 2010
    Last sequence update: March 23, 2010
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3