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D3DHL1

- D3DHL1_HYDTT

UniProt

D3DHL1 - D3DHL1_HYDTT

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Protein
Elongation factor Tu
Gene
tufA1, tuf, tufA2, HTH_0853, HTH_0866, Hydth_0853, Hydth_0866
Organism
Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTP By similarityUniRule annotation
Nucleotide bindingi85 – 895GTP By similarityUniRule annotation
Nucleotide bindingi140 – 1434GTP By similarityUniRule annotation

GO - Molecular functioni

  1. GTP binding Source: UniProtKB-HAMAP
  2. GTPase activity Source: InterPro
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotationImported

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufA1Imported
Synonyms:tufUniRule annotation, tufA2Imported
Ordered Locus Names:HTH_0853Imported, HTH_0866Imported, Hydth_0853Imported, Hydth_0866Imported
OrganismiHydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)
Taxonomic identifieri608538 [NCBI]
Taxonomic lineageiBacteriaAquificaeAquificalesAquificaceaeHydrogenobacter
ProteomesiUP000002574: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000229290.
KOiK02358.
OMAiTIIPHTE.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3DHL1-1 [UniParc]FASTAAdd to Basket

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MAKEKFIREK EHVNVGTIGH VDHGKSTLTS AITCVLAAGV LPGGKAKCTK    50
YEEIDKAPEE KERGITINIT HVEYETPKRH YAHVDCPGHA DYIKNMITGA 100
AQMDGAILVV SAADGPMPQT REHVLLARQV NVPYIVVFMN KCDMVDDPEL 150
LDLVELEVRE LLSKYEFPGD EVPVIRGSAL GALQELEQGK PDRWCNAIVE 200
LLKAMDEYVP TPVREADKPF LMPIEDVFSI SGRGTVVTGR VERGVLKPGE 250
EVEIVGIREE PLKTVATSIE MFRKILDEAL PGDNVGVLLR GVGKDDVERG 300
QVLAKPGTVK PHKRFRAQVY VLSKEEGGRH TPFFVNYRPQ FYFRTADVTG 350
TVVKLPEGQE MVMPGDNVEL EVELIQPVAM EEGLRFAIRE GGRTVGAGVV 400
TQILD 405
Length:405
Mass (Da):44,728
Last modified:March 23, 2010 - v1
Checksum:i159ADE82C8DFF133
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002221 Genomic DNA. Translation: ADO45250.1.
CP002221 Genomic DNA. Translation: ADO45263.1.
AP011112 Genomic DNA. Translation: BAI69313.1.
AP011112 Genomic DNA. Translation: BAI69326.1.
RefSeqiYP_003432514.1. NC_013799.1.
YP_003432527.1. NC_013799.1.
YP_005511543.1. NC_017161.1.
YP_005511556.1. NC_017161.1.

Genome annotation databases

EnsemblBacteriaiADO45250; ADO45250; Hydth_0853.
ADO45263; ADO45263; Hydth_0866.
BAI69313; BAI69313; HTH_0853.
BAI69326; BAI69326; HTH_0866.
GeneIDi12100996.
12101010.
8773839.
8773860.
KEGGihte:Hydth_0853.
hte:Hydth_0866.
hth:HTH_0853.
hth:HTH_0866.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002221 Genomic DNA. Translation: ADO45250.1 .
CP002221 Genomic DNA. Translation: ADO45263.1 .
AP011112 Genomic DNA. Translation: BAI69313.1 .
AP011112 Genomic DNA. Translation: BAI69326.1 .
RefSeqi YP_003432514.1. NC_013799.1.
YP_003432527.1. NC_013799.1.
YP_005511543.1. NC_017161.1.
YP_005511556.1. NC_017161.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADO45250 ; ADO45250 ; Hydth_0853 .
ADO45263 ; ADO45263 ; Hydth_0866 .
BAI69313 ; BAI69313 ; HTH_0853 .
BAI69326 ; BAI69326 ; HTH_0866 .
GeneIDi 12100996.
12101010.
8773839.
8773860.
KEGGi hte:Hydth_0853.
hte:Hydth_0866.
hth:HTH_0853.
hth:HTH_0866.

Phylogenomic databases

HOGENOMi HOG000229290.
KOi K02358.
OMAi TIIPHTE.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the thermophilic, obligately chemolithoautotrophic hydrogen-oxidizing bacterium Hydrogenobacter thermophilus TK-6."
    Arai H., Kanbe H., Ishii M., Igarashi Y.
    J. Bacteriol. 192:2651-2652(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 6534 / IAM 12695 / TK-6 [Tokyo] and TK-6.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 6534 / IAM 12695 / TK-6 [JGI] and TK-6Imported.

Entry informationi

Entry nameiD3DHL1_HYDTT
AccessioniPrimary (citable) accession number: D3DHL1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: June 11, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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