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D3DHL1

- D3DHL1_HYDTT

UniProt

D3DHL1 - D3DHL1_HYDTT

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Protein

Elongation factor Tu

Gene

tufA1

Organism
Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTPUniRule annotation
Nucleotide bindingi85 – 895GTPUniRule annotation
Nucleotide bindingi140 – 1434GTPUniRule annotation

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-HAMAP
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotation

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufA1Imported
Synonyms:tufUniRule annotation, tufA2Imported
Ordered Locus Names:HTH_0853Imported, HTH_0866Imported, Hydth_0853Imported, Hydth_0866Imported
OrganismiHydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)Imported
Taxonomic identifieri608538 [NCBI]
Taxonomic lineageiBacteriaAquificaeAquificalesAquificaceaeHydrogenobacter
ProteomesiUP000008982: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000229290.
KOiK02358.
OMAiTIIPHTE.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3DHL1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MAKEKFIREK EHVNVGTIGH VDHGKSTLTS AITCVLAAGV LPGGKAKCTK
60 70 80 90 100
YEEIDKAPEE KERGITINIT HVEYETPKRH YAHVDCPGHA DYIKNMITGA
110 120 130 140 150
AQMDGAILVV SAADGPMPQT REHVLLARQV NVPYIVVFMN KCDMVDDPEL
160 170 180 190 200
LDLVELEVRE LLSKYEFPGD EVPVIRGSAL GALQELEQGK PDRWCNAIVE
210 220 230 240 250
LLKAMDEYVP TPVREADKPF LMPIEDVFSI SGRGTVVTGR VERGVLKPGE
260 270 280 290 300
EVEIVGIREE PLKTVATSIE MFRKILDEAL PGDNVGVLLR GVGKDDVERG
310 320 330 340 350
QVLAKPGTVK PHKRFRAQVY VLSKEEGGRH TPFFVNYRPQ FYFRTADVTG
360 370 380 390 400
TVVKLPEGQE MVMPGDNVEL EVELIQPVAM EEGLRFAIRE GGRTVGAGVV

TQILD
Length:405
Mass (Da):44,728
Last modified:March 23, 2010 - v1
Checksum:i159ADE82C8DFF133
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002221 Genomic DNA. Translation: ADO45250.1.
CP002221 Genomic DNA. Translation: ADO45263.1.
AP011112 Genomic DNA. Translation: BAI69313.1.
AP011112 Genomic DNA. Translation: BAI69326.1.
RefSeqiWP_012963494.1. NC_017161.1.
YP_003432514.1. NC_013799.1.
YP_003432527.1. NC_013799.1.
YP_005511543.1. NC_017161.1.
YP_005511556.1. NC_017161.1.

Genome annotation databases

EnsemblBacteriaiADO45250; ADO45250; Hydth_0853.
ADO45263; ADO45263; Hydth_0866.
BAI69313; BAI69313; HTH_0853.
BAI69326; BAI69326; HTH_0866.
GeneIDi12100996.
12101010.
8773839.
8773860.
KEGGihte:Hydth_0853.
hte:Hydth_0866.
hth:HTH_0853.
hth:HTH_0866.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002221 Genomic DNA. Translation: ADO45250.1 .
CP002221 Genomic DNA. Translation: ADO45263.1 .
AP011112 Genomic DNA. Translation: BAI69313.1 .
AP011112 Genomic DNA. Translation: BAI69326.1 .
RefSeqi WP_012963494.1. NC_017161.1.
YP_003432514.1. NC_013799.1.
YP_003432527.1. NC_013799.1.
YP_005511543.1. NC_017161.1.
YP_005511556.1. NC_017161.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADO45250 ; ADO45250 ; Hydth_0853 .
ADO45263 ; ADO45263 ; Hydth_0866 .
BAI69313 ; BAI69313 ; HTH_0853 .
BAI69326 ; BAI69326 ; HTH_0866 .
GeneIDi 12100996.
12101010.
8773839.
8773860.
KEGGi hte:Hydth_0853.
hte:Hydth_0866.
hth:HTH_0853.
hth:HTH_0866.

Phylogenomic databases

HOGENOMi HOG000229290.
KOi K02358.
OMAi TIIPHTE.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the thermophilic, obligately chemolithoautotrophic hydrogen-oxidizing bacterium Hydrogenobacter thermophilus TK-6."
    Arai H., Kanbe H., Ishii M., Igarashi Y.
    J. Bacteriol. 192:2651-2652(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TK-6.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 6534 / IAM 12695 / TK-6 [JGI]Imported and TK-6Imported.

Entry informationi

Entry nameiD3DHL1_HYDTT
AccessioniPrimary (citable) accession number: D3DHL1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: October 29, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

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