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D3DG54 (D3DG54_HYDTT) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Uncharacterized protein EMBL ADO44741.1
Gene names
Ordered Locus Names:HTH_0340 EMBL BAI68806.1, Hydth_0338 EMBL ADO44741.1
OrganismHydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) [Complete proteome] [HAMAP]
Taxonomic identifier608538 [NCBI]
Taxonomic lineageBacteriaAquificaeAquificalesAquificaceaeHydrogenobacter

Protein attributes

Sequence length381 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
D3DG54 [UniParc].

Last modified March 23, 2010. Version 1.
Checksum: C767693ED30EBE89

FASTA38142,113
        10         20         30         40         50         60 
MRITLSVIKA DVGGYVGHSG VHPQLVETIK EFVQEEVKKG ILIDASVLVC GDDTAIVMTH 

        70         80         90        100        110        120 
THGVDSEIVH GIAWRAFEKA TEVAKKLKLY GAGQDLLSTA FSGNVKGMGP GVAEMEFEER 

       130        140        150        160        170        180 
PSEPVIVFFA DKTAPSAWNL PLYEMFADPM VCAGLVIDPK MHDGFTFEVL DTYTGKAVKL 

       190        200        210        220        230        240 
STPSELYELL ALIGTVERYA IRSVWRNNDG EIAAVASTQR LSLIAGKYVG KDDPVMVVRA 

       250        260        270        280        290        300 
QAGFPAVGEI LEPFARPWIV EGWMRGSHNG PLMPVSFKNA TPTRFDGPPR VIAAGYQIAE 

       310        320        330        340        350        360 
GKLIGPRDLF DDPAFDKARE QAQLMADMLR RQGIFEPHRL PSEEMEYTTL PKILKKLEER 

       370        380 
FYELEAPRKA VEDPVEKHDI D 

« Hide

References

[1]"Complete genome sequence of the thermophilic, obligately chemolithoautotrophic hydrogen-oxidizing bacterium Hydrogenobacter thermophilus TK-6."
Arai H., Kanbe H., Ishii M., Igarashi Y.
J. Bacteriol. 192:2651-2652(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 6534 / IAM 12695 / TK-6 [Tokyo] and TK-6.
[2]"Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6)."
US DOE Joint Genome Institute (JGI-PGF)
Zeytun A., Sikorski J., Nolan M., Lapidus A., Lucas S., Han J., Tice H., Cheng J., Tapia R., Goodwin L., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Ovchinnikova G., Pati A., Chen A. expand/collapse author list , Palaniappan K., Ngatchou O., Land M., Hauser L., Chang Y., Jeffries C., Han C., Detter J., Ubler S., Rohde M., Tindall B., Wirth R., Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Klenk H., Kyrpides N.
Stand. Genomic Sci. 4:131-143(2011)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 6534 / IAM 12695 / TK-6 [JGI] and TK-6 EMBL ADO44741.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002221 Genomic DNA. Translation: ADO44741.1.
AP011112 Genomic DNA. Translation: BAI68806.1.
RefSeqYP_003432007.1. NC_013799.1.
YP_005511034.1. NC_017161.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADO44741; ADO44741; Hydth_0338.
BAI68806; BAI68806; HTH_0340.
GeneID12101511.
8773890.
KEGGhte:Hydth_0338.
hth:HTH_0340.
PATRIC32209553. VBIHydThe36152_0340.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229394.
KOK01622.
OMAHTHGVDS.

Family and domain databases

InterProIPR002803. FBPase_V.
[Graphical view]
PfamPF01950. FBPase_3. 1 hit.
[Graphical view]
PIRSFPIRSF015647. FBPtase_archl. 1 hit.
SUPFAMSSF111249. SSF111249. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD3DG54_HYDTT
AccessionPrimary (citable) accession number: D3DG54
Entry history
Integrated into UniProtKB/TrEMBL: March 23, 2010
Last sequence update: March 23, 2010
Last modified: May 14, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)