D2UGV5 (D2UGV5_XANAP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative isocitrate dehydrogenase protein EMBL CBA17616.1
EC=1.1.1.42 EMBL CBA17616.1

Gene names

Ordered Locus Names:

XALC_3137 EMBL CBA17616.1, XALc_3137

Organism

Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) [Complete proteome] [HAMAP] EMBL CBA17616.1

Taxonomic identifier

380358 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas › Xanthomonas albilineans

Protein attributes

Sequence length	494 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the isocitrate and isopropylmalate dehydrogenases family. RuleBase RU004443

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU004444 EMBL CBA17616.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glyoxylate cycle Inferred from electronic annotation. Source: InterPro tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	NAD binding Inferred from electronic annotation. Source: InterPro isocitrate dehydrogenase (NADP+) activity Inferred from electronic annotation. Source: EC magnesium ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D2UGV5 [UniParc]. Last modified March 2, 2010. Version 1. Checksum: 416E9C34B461EFD1	FASTA	494	53,350
	10 20 30 40 50 60 MSALPNPAAV RLPARTIAVA EGDGIGPEIT RAVLKILTAA DPGLSFTPLT VGLEAYRAGH 70 80 90 100 110 120 AAGFDRSVID AVTEHGVLLK GPITTPQGGG YKSVNVSLRK TFGLYANLRP CVAYHPFVAT 130 140 150 160 170 180 HHPGMDVVIV RENEEDTYAG IEHQQTDEVV QCLKLVSRPG CERIVRYAFE YARAHGRGKV 190 200 210 220 230 240 TCMTKDNIMK LTDGLFHRVF DEIAKEYPEI ANDHMIIDIG TAKMAVDPRR FDVVVTPNLY 250 260 270 280 290 300 GDILSDVAAE VAGSIGLAPS SNIGRHCAMF EAVHGSAPDI AGRDLANPSG LLLSAVMMLV 310 320 330 340 350 360 HLQRPAAATA IHNAWLRTLE EGLHTADIFG SHSQRQVGTQ EFADAVIARL GQKPQQIAAV 370 380 390 400 410 420 DYPEQPKQSA APVIESARAK VAKTLEGVDV FVHWDHPGRD ADTLGNQLQA LAGPDLRLAL 430 440 450 460 470 480 ITNRGVKVYP SGLQQTTRTD HWRCRFLAAD GTTLKPAHIC SLLLRLSEAG FETVKTENLY 490 AFDGVRGYSQ AQGE

References

[1]

"The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae." Pieretti I., Royer M., Barbe V., Carrere S., Koebnik R., Cociancich S., Couloux A., Darrasse A., Gouzy J., Jacques M.A., Lauber E., Manceau C., Mangenot S., Poussier S., Segurens B., Szurek B., Verdier V., Arlat M., Rott P. BMC Genomics 10:616-616(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: GPE PC73 / CFBP 7063.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FP565176 Genomic DNA. Translation: CBA17616.1.
RefSeq	YP_003377610.1. NC_013722.1.
3D structure databases
ProteinModelPortal	D2UGV5.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8702314.
KEGG	xal:XALc_3137.
PATRIC	32548795. VBIXanAlb89132_3117.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000021113.
KO	K00031.
Family and domain databases
Gene3D	3.40.718.10. 1 hit.
InterPro	IPR019818. IsoCit/isopropylmalate_DH_CS. IPR001804. Isocitrate/isopropylmalate_DH. IPR014273. Isocitrate_DH_aproteobac-typ. IPR024084. IsoPropMal-DH-like_dom. [Graphical view]
PANTHER	PTHR11835. PTHR11835. 1 hit.
Pfam	PF00180. Iso_dh. 1 hit. [Graphical view]
TIGRFAMs	TIGR02924. ICDH_alpha. 1 hit.
PROSITE	PS00470. IDH_IMDH. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D2UGV5_XANAP

Accession

Primary (citable) accession number: D2UGV5

Entry history

Integrated into UniProtKB/TrEMBL:	March 2, 2010
Last sequence update:	March 2, 2010
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)