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D2UGV5

- D2UGV5_XANAP

UniProt

D2UGV5 - D2UGV5_XANAP

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Protein
Submitted name: Putative isocitrate dehydrogenase protein
Gene
XALC_3137
Organism
Xanthomonas albilineans (strain GPE PC73 / CFBP 7063)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. NAD binding Source: InterPro
  2. isocitrate dehydrogenase (NADP+) activity Source: UniProtKB-EC
  3. magnesium ion binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. glyoxylate cycle Source: InterPro
  2. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciXALB29447:GJN1-3136-MONOMER.
XALB380358:GLMQ-3136-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative isocitrate dehydrogenase proteinImported (EC:1.1.1.42Imported)
Gene namesi
Ordered Locus Names:XALC_3137Imported
OrganismiXanthomonas albilineans (strain GPE PC73 / CFBP 7063)Imported
Taxonomic identifieri380358 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000001890: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD2UGV5.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000021113.
KOiK00031.

Family and domain databases

Gene3Di3.40.718.10. 1 hit.
InterProiIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR014273. Isocitrate_DH_aproteobac-typ.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERiPTHR11835. PTHR11835. 1 hit.
PfamiPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02924. ICDH_alpha. 1 hit.
PROSITEiPS00470. IDH_IMDH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D2UGV5-1 [UniParc]FASTAAdd to Basket

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MSALPNPAAV RLPARTIAVA EGDGIGPEIT RAVLKILTAA DPGLSFTPLT    50
VGLEAYRAGH AAGFDRSVID AVTEHGVLLK GPITTPQGGG YKSVNVSLRK 100
TFGLYANLRP CVAYHPFVAT HHPGMDVVIV RENEEDTYAG IEHQQTDEVV 150
QCLKLVSRPG CERIVRYAFE YARAHGRGKV TCMTKDNIMK LTDGLFHRVF 200
DEIAKEYPEI ANDHMIIDIG TAKMAVDPRR FDVVVTPNLY GDILSDVAAE 250
VAGSIGLAPS SNIGRHCAMF EAVHGSAPDI AGRDLANPSG LLLSAVMMLV 300
HLQRPAAATA IHNAWLRTLE EGLHTADIFG SHSQRQVGTQ EFADAVIARL 350
GQKPQQIAAV DYPEQPKQSA APVIESARAK VAKTLEGVDV FVHWDHPGRD 400
ADTLGNQLQA LAGPDLRLAL ITNRGVKVYP SGLQQTTRTD HWRCRFLAAD 450
GTTLKPAHIC SLLLRLSEAG FETVKTENLY AFDGVRGYSQ AQGE 494
Length:494
Mass (Da):53,350
Last modified:March 2, 2010 - v1
Checksum:i416E9C34B461EFD1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP565176 Genomic DNA. Translation: CBA17616.1.
RefSeqiYP_003377610.1. NC_013722.1.

Genome annotation databases

EnsemblBacteriaiCBA17616; CBA17616; XALC_3137.
GeneIDi8702314.
KEGGixal:XALc_3137.
PATRICi32548795. VBIXanAlb89132_3117.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP565176 Genomic DNA. Translation: CBA17616.1 .
RefSeqi YP_003377610.1. NC_013722.1.

3D structure databases

ProteinModelPortali D2UGV5.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBA17616 ; CBA17616 ; XALC_3137 .
GeneIDi 8702314.
KEGGi xal:XALc_3137.
PATRICi 32548795. VBIXanAlb89132_3117.

Phylogenomic databases

HOGENOMi HOG000021113.
KOi K00031.

Enzyme and pathway databases

BioCyci XALB29447:GJN1-3136-MONOMER.
XALB380358:GLMQ-3136-MONOMER.

Family and domain databases

Gene3Di 3.40.718.10. 1 hit.
InterProi IPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR014273. Isocitrate_DH_aproteobac-typ.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view ]
PANTHERi PTHR11835. PTHR11835. 1 hit.
Pfami PF00180. Iso_dh. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02924. ICDH_alpha. 1 hit.
PROSITEi PS00470. IDH_IMDH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae."
    Pieretti I., Royer M., Barbe V., Carrere S., Koebnik R., Cociancich S., Couloux A., Darrasse A., Gouzy J., Jacques M.A., Lauber E., Manceau C., Mangenot S., Poussier S., Segurens B., Szurek B., Verdier V., Arlat M., Rott P.
    BMC Genomics 10:616-616(2009)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GPE PC73 / CFBP 7063.

Entry informationi

Entry nameiD2UGV5_XANAP
AccessioniPrimary (citable) accession number: D2UGV5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: June 11, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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