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D2UGV5 (D2UGV5_XANAP) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.1.1.42 EMBL CBA17616.1
Gene names
Ordered Locus Names:XALC_3137 EMBL CBA17616.1
OrganismXanthomonas albilineans (strain GPE PC73 / CFBP 7063) [Complete proteome] [HAMAP] EMBL CBA17616.1
Taxonomic identifier380358 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas

Protein attributes

Sequence length494 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
D2UGV5 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: 416E9C34B461EFD1

FASTA49453,350
        10         20         30         40         50         60 
MSALPNPAAV RLPARTIAVA EGDGIGPEIT RAVLKILTAA DPGLSFTPLT VGLEAYRAGH 

        70         80         90        100        110        120 
AAGFDRSVID AVTEHGVLLK GPITTPQGGG YKSVNVSLRK TFGLYANLRP CVAYHPFVAT 

       130        140        150        160        170        180 
HHPGMDVVIV RENEEDTYAG IEHQQTDEVV QCLKLVSRPG CERIVRYAFE YARAHGRGKV 

       190        200        210        220        230        240 
TCMTKDNIMK LTDGLFHRVF DEIAKEYPEI ANDHMIIDIG TAKMAVDPRR FDVVVTPNLY 

       250        260        270        280        290        300 
GDILSDVAAE VAGSIGLAPS SNIGRHCAMF EAVHGSAPDI AGRDLANPSG LLLSAVMMLV 

       310        320        330        340        350        360 
HLQRPAAATA IHNAWLRTLE EGLHTADIFG SHSQRQVGTQ EFADAVIARL GQKPQQIAAV 

       370        380        390        400        410        420 
DYPEQPKQSA APVIESARAK VAKTLEGVDV FVHWDHPGRD ADTLGNQLQA LAGPDLRLAL 

       430        440        450        460        470        480 
ITNRGVKVYP SGLQQTTRTD HWRCRFLAAD GTTLKPAHIC SLLLRLSEAG FETVKTENLY 

       490 
AFDGVRGYSQ AQGE 

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References

[1]"The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae."
Pieretti I., Royer M., Barbe V., Carrere S., Koebnik R., Cociancich S., Couloux A., Darrasse A., Gouzy J., Jacques M.A., Lauber E., Manceau C., Mangenot S., Poussier S., Segurens B., Szurek B., Verdier V., Arlat M., Rott P.
BMC Genomics 10:616-616(2009)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GPE PC73 / CFBP 7063.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FP565176 Genomic DNA. Translation: CBA17616.1.
RefSeqYP_003377610.1. NC_013722.1.

3D structure databases

ProteinModelPortalD2UGV5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBA17616; CBA17616; XALC_3137.
GeneID8702314.
KEGGxal:XALc_3137.
PATRIC32548795. VBIXanAlb89132_3117.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000021113.
KOK00031.

Enzyme and pathway databases

BioCycXALB29447:GJN1-3136-MONOMER.
XALB380358:GLMQ-3136-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 1 hit.
InterProIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR014273. Isocitrate_DH_aproteobac-typ.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERPTHR11835. PTHR11835. 1 hit.
PfamPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsTIGR02924. ICDH_alpha. 1 hit.
PROSITEPS00470. IDH_IMDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2UGV5_XANAP
AccessionPrimary (citable) accession number: D2UGV5
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: June 11, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)