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D2UGV5

- D2UGV5_XANAP

UniProt

D2UGV5 - D2UGV5_XANAP

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Protein
Submitted name:

Putative isocitrate dehydrogenase protein

Gene

XALC_3137

Organism
Xanthomonas albilineans (strain GPE PC73 / CFBP 7063)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. isocitrate dehydrogenase (NADP+) activity Source: UniProtKB-EC
  2. magnesium ion binding Source: InterPro
  3. NAD binding Source: InterPro

GO - Biological processi

  1. glyoxylate cycle Source: InterPro
  2. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciXALB29447:GJN1-3136-MONOMER.
XALB380358:GLMQ-3136-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative isocitrate dehydrogenase proteinImported (EC:1.1.1.42Imported)
Gene namesi
Ordered Locus Names:XALC_3137Imported
OrganismiXanthomonas albilineans (strain GPE PC73 / CFBP 7063)Imported
Taxonomic identifieri380358 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000001890: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD2UGV5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the isocitrate and isopropylmalate dehydrogenases family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000021113.
KOiK00031.

Family and domain databases

Gene3Di3.40.718.10. 1 hit.
InterProiIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR014273. Isocitrate_DH_aproteobac-typ.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERiPTHR11835. PTHR11835. 1 hit.
PfamiPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02924. ICDH_alpha. 1 hit.
PROSITEiPS00470. IDH_IMDH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D2UGV5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSALPNPAAV RLPARTIAVA EGDGIGPEIT RAVLKILTAA DPGLSFTPLT
60 70 80 90 100
VGLEAYRAGH AAGFDRSVID AVTEHGVLLK GPITTPQGGG YKSVNVSLRK
110 120 130 140 150
TFGLYANLRP CVAYHPFVAT HHPGMDVVIV RENEEDTYAG IEHQQTDEVV
160 170 180 190 200
QCLKLVSRPG CERIVRYAFE YARAHGRGKV TCMTKDNIMK LTDGLFHRVF
210 220 230 240 250
DEIAKEYPEI ANDHMIIDIG TAKMAVDPRR FDVVVTPNLY GDILSDVAAE
260 270 280 290 300
VAGSIGLAPS SNIGRHCAMF EAVHGSAPDI AGRDLANPSG LLLSAVMMLV
310 320 330 340 350
HLQRPAAATA IHNAWLRTLE EGLHTADIFG SHSQRQVGTQ EFADAVIARL
360 370 380 390 400
GQKPQQIAAV DYPEQPKQSA APVIESARAK VAKTLEGVDV FVHWDHPGRD
410 420 430 440 450
ADTLGNQLQA LAGPDLRLAL ITNRGVKVYP SGLQQTTRTD HWRCRFLAAD
460 470 480 490
GTTLKPAHIC SLLLRLSEAG FETVKTENLY AFDGVRGYSQ AQGE
Length:494
Mass (Da):53,350
Last modified:March 2, 2010 - v1
Checksum:i416E9C34B461EFD1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP565176 Genomic DNA. Translation: CBA17616.1.
RefSeqiYP_003377610.1. NC_013722.1.

Genome annotation databases

EnsemblBacteriaiCBA17616; CBA17616; XALC_3137.
GeneIDi8702314.
KEGGixal:XALc_3137.
PATRICi32548795. VBIXanAlb89132_3117.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP565176 Genomic DNA. Translation: CBA17616.1 .
RefSeqi YP_003377610.1. NC_013722.1.

3D structure databases

ProteinModelPortali D2UGV5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBA17616 ; CBA17616 ; XALC_3137 .
GeneIDi 8702314.
KEGGi xal:XALc_3137.
PATRICi 32548795. VBIXanAlb89132_3117.

Phylogenomic databases

HOGENOMi HOG000021113.
KOi K00031.

Enzyme and pathway databases

BioCyci XALB29447:GJN1-3136-MONOMER.
XALB380358:GLMQ-3136-MONOMER.

Family and domain databases

Gene3Di 3.40.718.10. 1 hit.
InterProi IPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR014273. Isocitrate_DH_aproteobac-typ.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view ]
PANTHERi PTHR11835. PTHR11835. 1 hit.
Pfami PF00180. Iso_dh. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02924. ICDH_alpha. 1 hit.
PROSITEi PS00470. IDH_IMDH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae."
    Pieretti I., Royer M., Barbe V., Carrere S., Koebnik R., Cociancich S., Couloux A., Darrasse A., Gouzy J., Jacques M.A., Lauber E., Manceau C., Mangenot S., Poussier S., Segurens B., Szurek B., Verdier V., Arlat M., Rott P.
    BMC Genomics 10:616-616(2009)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GPE PC73 / CFBP 7063Imported.

Entry informationi

Entry nameiD2UGV5_XANAP
AccessioniPrimary (citable) accession number: D2UGV5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: October 1, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3