Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Probable 2-oxoglutarate dehydrogenase protein

Gene

sucA

Organism
Xanthomonas albilineans (strain GPE PC73 / CFBP 7063)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciXALB29447:GJN1-1664-MONOMER.
XALB380358:GLMQ-1664-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable 2-oxoglutarate dehydrogenase proteinImported (EC:1.2.4.2Imported)
Gene namesi
Name:sucAImported
Ordered Locus Names:XALC_1668Imported
OrganismiXanthomonas albilineans (strain GPE PC73 / CFBP 7063)Imported
Taxonomic identifieri380358 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000001890: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD2UDU3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000259588.
KOiK00164.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

D2UDU3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDNLLKQFAQ SSQLAAGNAA YIEDLYEQYL VSPDSIDPKW KTYFDGFQGR
60 70 80 90 100
DAGDVPHSAV IAHIASAARQ AGNSGTGPSG DERERHVGRL ITAYRSRGHL
110 120 130 140 150
GARLDPLGLT PPINPPDLGL PFHSLSESDL GSEFSTGGLG GQPRMKLRDL
160 170 180 190 200
LARLKATYTG SIGSEFMHIS EFEQRQWIYQ RLENVGGQIT ADVASRRRIL
210 220 230 240 250
ERITAAEGLE RYLHTKYVGQ KRFSLEGGDA LIPLMDVLVQ RGGSDAVKDI
260 270 280 290 300
VIGMAHRGRL NVLVNTLGKN PRKLFDEFEG KFEHAHDDRA HTGDVKYHMG
310 320 330 340 350
FSADVAVANG ASVHLALAFN PSHLEIVDPV VVGSVRSRQE RYGDAARKSV
360 370 380 390 400
LPVIIHGDAA FAGQGVVMEL FQMSQARGFA VGGTVHIVIN NQIGFTTSAR
410 420 430 440 450
DDARSTLYCT DVAKMIGAPV FHVNGDDPDA VAFVANIAYD FRQKFNKDVV
460 470 480 490 500
IDLVCYRRWG HNEADEPAAT QPVMYQTIRK HKTTRELYAA QLESEGVLQP
510 520 530 540 550
GEGQALVDAY RNKLDSGEYT TELAPRKHDE FAIDWSKYLS GKLSDKVNTT
560 570 580 590 600
VKRKTLDQLA KIITTIPESV ELHPRVAKIY EDRVKMAAGE LPADWGFAEN
610 620 630 640 650
LAYATLLNEG HKLRLVGQDA GRGTFFHRHA ILHDQKNDSY YLPLRQLVQN
660 670 680 690 700
PEDATVIDSL LSEEAVMGFE YGYSTTDPNA LCIWEAQFGD FANGAQVVID
710 720 730 740 750
QFIAAGEAKW GRIAGLSLFL PHGYEGQGPE HSSARLERFL QLCALENMLV
760 770 780 790 800
CVPTTPAQAF HMIRRQMRMS TRKPLVVMTP KSLLRHKLAV SSLKELADGE
810 820 830 840 850
FQHLIPDSKA EPKKVKRVIA CSGKVYYDLL EDQLKRGQED VAILRVEQLY
860 870 880 890 900
PFPRALLAAE LKRYGNATDL VWCQEEPQNQ GAWYQIKHHL QACLADGQSL
910 920 930 940
HYAGRPRSPS PAAGHLAEHL EEQLKLVADA LLNPFNDQVA E
Length:941
Mass (Da):104,281
Last modified:March 2, 2010 - v1
Checksum:i24BA2C309B64A802
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP565176 Genomic DNA. Translation: CBA16165.1.
RefSeqiWP_012916166.1. NC_013722.1.
YP_003376155.1. NC_013722.1.

Genome annotation databases

EnsemblBacteriaiCBA16165; CBA16165; XALC_1668.
GeneIDi8701299.
KEGGixal:XALc_1668.
PATRICi32545787. VBIXanAlb89132_1629.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP565176 Genomic DNA. Translation: CBA16165.1.
RefSeqiWP_012916166.1. NC_013722.1.
YP_003376155.1. NC_013722.1.

3D structure databases

ProteinModelPortaliD2UDU3.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCBA16165; CBA16165; XALC_1668.
GeneIDi8701299.
KEGGixal:XALc_1668.
PATRICi32545787. VBIXanAlb89132_1629.

Phylogenomic databases

HOGENOMiHOG000259588.
KOiK00164.

Enzyme and pathway databases

BioCyciXALB29447:GJN1-1664-MONOMER.
XALB380358:GLMQ-1664-MONOMER.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae."
    Pieretti I., Royer M., Barbe V., Carrere S., Koebnik R., Cociancich S., Couloux A., Darrasse A., Gouzy J., Jacques M.A., Lauber E., Manceau C., Mangenot S., Poussier S., Segurens B., Szurek B., Verdier V., Arlat M., Rott P.
    BMC Genomics 10:616-616(2009)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GPE PC73 / CFBP 7063Imported.

Entry informationi

Entry nameiD2UDU3_XANAP
AccessioniPrimary (citable) accession number: D2UDU3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: March 4, 2015
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.