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Protein

Pseudouridine synthase

Gene

rluC

Organism
Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype 4280)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil.UniRule annotation

Catalytic activityi

RNA uridine = RNA pseudouridine.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Name:rluCImported
Ordered Locus Names:ROD_11481Imported
OrganismiCitrobacter rodentium (strain ICC168) (Citrobacter freundii biotype 4280)Imported
Taxonomic identifieri637910 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeCitrobacter
Proteomesi
  • UP000001889 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi637910.ROD_11481.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 83S4 RNA-bindingInterPro annotationAdd BLAST64

Sequence similaritiesi

Belongs to the pseudouridine synthase RluA family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105EI2. Bacteria.
COG0564. LUCA.
HOGENOMiHOG000275914.
KOiK06179.
OMAiPKTHVYR.
OrthoDBiPOG091H064O.

Family and domain databases

Gene3Di3.10.290.10. 1 hit.
InterProiView protein in InterPro
IPR020103. PsdUridine_synth_cat_dom.
IPR006225. PsdUridine_synth_RluC/D.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
IPR002942. S4_RNA-bd.
PfamiView protein in Pfam
PF00849. PseudoU_synth_2. 1 hit.
PF01479. S4. 1 hit.
SMARTiView protein in SMART
SM00363. S4. 1 hit.
SUPFAMiSSF55120. SSF55120. 1 hit.
TIGRFAMsiTIGR00005. rluA_subfam. 1 hit.
PROSITEiView protein in PROSITE
PS01129. PSI_RLU. 1 hit.
PS50889. S4. 1 hit.

Sequencei

Sequence statusi: Complete.

D2TTS0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTETPSVKI VAITADEAGQ RIDNFLRTQL KGVPKSMIYR ILRKGEVRVN
60 70 80 90 100
KKRIKPEYKL EAGDEIRIPP VRVAEREEEA VSPHLQKVAA LADVILYEDD
110 120 130 140 150
HILVLNKPSG TAVHGGSGLS FGVIEGLRAL RPEARFLELV HRLDRDTSGV
160 170 180 190 200
LLVAKKRSAL RSLHEQLREK GMQKDYLALV RGQWQSHVKN VQAPLLKNIL
210 220 230 240 250
QSGERIVRVS QEGKPSETRF KVEERYAFAT LVRCSPVTGR THQIRVHTQY
260 270 280 290 300
AGHPIAFDDR YGDREFDKQL AATGLSRLFL HAAALKFTHP GTGEVLRIEA
310
PMDGQLKHCL QVLRKPG
Length:317
Mass (Da):35,670
Last modified:March 2, 2010 - v1
Checksum:i5D6A163A4B9B0194
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN543502 Genomic DNA. Translation: CBG87914.1.

Genome annotation databases

EnsemblBacteriaiCBG87914; CBG87914; ROD_11481.
KEGGicro:ROD_11481.

Similar proteinsi

Entry informationi

Entry nameiD2TTS0_CITRI
AccessioniPrimary (citable) accession number: D2TTS0
Entry historyiIntegrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: September 27, 2017
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported