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D2TPF5

- D2TPF5_CITRI

UniProt

D2TPF5 - D2TPF5_CITRI

Protein

2,3-bisphosphoglycerate-dependent phosphoglycerate mutase

Gene

gpmA

Organism
Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype 4280)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (02 Mar 2010)
      Previous versions | rss
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    Functioni

    Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.UniRule annotation

    Catalytic activityi

    2-phospho-D-glycerate = 3-phospho-D-glycerate.UniRule annotationSAAS annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei11 – 111Tele-phosphohistidine intermediateUniRule annotation
    Binding sitei17 – 1712-phospho-D-glycerateUniRule annotation
    Binding sitei62 – 6212-phospho-D-glycerateUniRule annotation
    Binding sitei100 – 10012-phospho-D-glycerateUniRule annotation
    Active sitei184 – 1841UniRule annotation
    Binding sitei186 – 18612-phospho-D-glycerateUniRule annotation

    GO - Molecular functioni

    1. 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. glycolytic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotation

    Keywords - Biological processi

    GlycolysisUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciCROD637910:GJIG-771-MONOMER.
    UniPathwayiUPA00109; UER00186.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    2,3-bisphosphoglycerate-dependent phosphoglycerate mutaseUniRule annotation (EC:5.4.2.11UniRule annotation)
    Short name:
    BPG-dependent PGAMUniRule annotation
    Short name:
    PGAMUniRule annotation
    Short name:
    PhosphoglyceromutaseUniRule annotation
    Short name:
    dPGMUniRule annotation
    Gene namesi
    Name:gpmAUniRule annotationImported
    Ordered Locus Names:ROD_07471Imported
    OrganismiCitrobacter rodentium (strain ICC168) (Citrobacter freundii biotype 4280)Imported
    Taxonomic identifieri637910 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeCitrobacter
    ProteomesiUP000001889: Chromosome

    Interactioni

    Subunit structurei

    Homodimer.UniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliD2TPF5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni23 – 2422-phospho-D-glycerate bindingUniRule annotation
    Regioni89 – 9242-phospho-D-glycerate bindingUniRule annotation
    Regioni116 – 11722-phospho-D-glycerate bindingUniRule annotation

    Sequence similaritiesi

    Belongs to the phosphoglycerate mutase family. BPG-dependent PGAM subfamily.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000221682.
    KOiK01834.
    OMAiKDDERFP.

    Family and domain databases

    Gene3Di3.40.50.1240. 1 hit.
    HAMAPiMF_01039. PGAM_GpmA.
    InterProiIPR013078. His_Pase_superF_clade-1.
    IPR029033. His_PPase_superfam.
    IPR001345. PG/BPGM_mutase_AS.
    IPR005952. Phosphogly_mut1.
    [Graphical view]
    PANTHERiPTHR11931. PTHR11931. 1 hit.
    PfamiPF00300. His_Phos_1. 1 hit.
    [Graphical view]
    SMARTiSM00855. PGAM. 1 hit.
    [Graphical view]
    SUPFAMiSSF53254. SSF53254. 1 hit.
    TIGRFAMsiTIGR01258. pgm_1. 1 hit.
    PROSITEiPS00175. PG_MUTASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D2TPF5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAVTKLVLVR HGESQWNNEN RFTGWYDVDL SEKGVGEAKA AGKLLKEEGY    50
    SFDFAYTSVL KRAIHTLWNV LDELDQAWLP VEKSWKLNER HYGALQGLNK 100
    AETAEKYGDE QVKQWRRGFA VTPPELTKDD ERYPGHDPRY AKLTEKELPL 150
    TESLALTIDR VIPYWNETIL PRMKSGERVI IAAHGNSLRA LVKYLDNMSE 200
    DEILELNIPT GVPLVYEFDE NFKPIKHYYL GNADEIAAKA AAVANQGKAK 250
    Length:250
    Mass (Da):28,493
    Last modified:March 2, 2010 - v1
    Checksum:i1814C950DA5843FB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN543502 Genomic DNA. Translation: CBG87524.1.
    RefSeqiYP_003364371.1. NC_013716.1.

    Genome annotation databases

    EnsemblBacteriaiCBG87524; CBG87524; ROD_07471.
    GeneIDi8710392.
    KEGGicro:ROD_07471.
    PATRICi32025397. VBICitRod33214_0733.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN543502 Genomic DNA. Translation: CBG87524.1 .
    RefSeqi YP_003364371.1. NC_013716.1.

    3D structure databases

    ProteinModelPortali D2TPF5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBG87524 ; CBG87524 ; ROD_07471 .
    GeneIDi 8710392.
    KEGGi cro:ROD_07471.
    PATRICi 32025397. VBICitRod33214_0733.

    Phylogenomic databases

    HOGENOMi HOG000221682.
    KOi K01834.
    OMAi KDDERFP.

    Enzyme and pathway databases

    UniPathwayi UPA00109 ; UER00186 .
    BioCyci CROD637910:GJIG-771-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.1240. 1 hit.
    HAMAPi MF_01039. PGAM_GpmA.
    InterProi IPR013078. His_Pase_superF_clade-1.
    IPR029033. His_PPase_superfam.
    IPR001345. PG/BPGM_mutase_AS.
    IPR005952. Phosphogly_mut1.
    [Graphical view ]
    PANTHERi PTHR11931. PTHR11931. 1 hit.
    Pfami PF00300. His_Phos_1. 1 hit.
    [Graphical view ]
    SMARTi SM00855. PGAM. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53254. SSF53254. 1 hit.
    TIGRFAMsi TIGR01258. pgm_1. 1 hit.
    PROSITEi PS00175. PG_MUTASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli."
      Petty N.K., Bulgin R., Crepin V.F., Cerdeno-Tarraga A.M., Schroeder G.N., Quail M.A., Lennard N., Corton C., Barron A., Clark L., Toribio A.L., Parkhill J., Dougan G., Frankel G., Thomson N.R.
      J. Bacteriol. 192:525-538(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ICC168Imported.

    Entry informationi

    Entry nameiD2TPF5_CITRI
    AccessioniPrimary (citable) accession number: D2TPF5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 2, 2010
    Last sequence update: March 2, 2010
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3