D2TP95 (D2TP95_CITRI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Octaprenyl-diphosphate synthase EMBL CBG91328.1
EC=2.5.1.- EMBL CBG91328.1

Gene names

Name:	ispB EMBL CBG91328.1
Ordered Locus Names:	ROD_46331 EMBL CBG91328.1

Organism

Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype 4280) [Complete proteome] [HAMAP] EMBL CBG91328.1

Taxonomic identifier

637910 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Citrobacter › Citrobacter rodentium

Protein attributes

Sequence length	323 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the FPP/GGPP synthase family. RuleBase RU004466

Ontologies

Keywords
Biological process	Isoprene biosynthesis RuleBase RU004466
Molecular function	Transferase RuleBase RU004466 EMBL CBG91328.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	isoprenoid biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	transferase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D2TP95 [UniParc]. Last modified March 2, 2010. Version 1. Checksum: 7C2542D67EB06C75	FASTA	323	35,185
	10 20 30 40 50 60 MNLEKINELT AQDMAGVNAT ILEQLNSDVQ LINQLGYYIV SGGGKRIRPM IAVLAARAVG 70 80 90 100 110 120 YQGNAHVTIA ALIEFIHTAT LLHDDVVDES DMRRGKATAN AAFGNAASVL VGDFIYTRAF 130 140 150 160 170 180 QMMTSLGSLK VLEVMSEAVN VIAEGEVLQL MNVNDPDITE ENYMRVIYSK TARLFEAAAQ 190 200 210 220 230 240 CSGILAGCSD AQEKGLQDYG RYLGTAFQLI DDLLDYSADG EQLGKNVGDD LNEGKPTLPL 250 260 270 280 290 300 LHAMRHGTPE QAQMIRTAIE QGNGRHLLEP VLEAMNACGS LEWTRQRAEE EADKAIAALQ 310 320 TLPDTPWREA LIGLAHIAVQ RDR

References

[1]

"The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli." Petty N.K., Bulgin R., Crepin V.F., Cerdeno-Tarraga A.M., Schroeder G.N., Quail M.A., Lennard N., Corton C., Barron A., Clark L., Toribio A.L., Parkhill J., Dougan G., Frankel G., Thomson N.R. J. Bacteriol. 192:525-538(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ICC168 EMBL CBG91328.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FN543502 Genomic DNA. Translation: CBG91328.1.
RefSeq	YP_003368039.1. NC_013716.1.
3D structure databases
ProteinModelPortal	D2TP95.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBG91328; CBG91328; ROD_46331.
GeneID	8714761.
KEGG	cro:ROD_46331.
PATRIC	32032936. VBICitRod33214_4416.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000009102.
KO	K02523.
OMA	YITSAGG.
Enzyme and pathway databases
BioCyc	CROD637910:GJIG-4686-MONOMER.
Family and domain databases
Gene3D	1.10.600.10. 1 hit.
InterPro	IPR000092. Polyprenyl_synt. IPR017446. Polyprenyl_synth-rel. IPR008949. Terpenoid_synth. [Graphical view]
PANTHER	PTHR12001. PTHR12001. 1 hit.
Pfam	PF00348. polyprenyl_synt. 1 hit. [Graphical view]
SUPFAM	SSF48576. Terpenoid_synth. 1 hit.
PROSITE	PS00723. POLYPRENYL_SYNTHASE_1. 1 hit. PS00444. POLYPRENYL_SYNTHASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D2TP95_CITRI

Accession

Primary (citable) accession number: D2TP95

Entry history

Integrated into UniProtKB/TrEMBL:	March 2, 2010
Last sequence update:	March 2, 2010
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)