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Protein
Submitted name:

Alpha-amylase

Gene

malS

Organism
Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype 4280)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseImported, Hydrolase

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Name:malSImported
Ordered Locus Names:ROD_42381Imported
OrganismiCitrobacter rodentium (strain ICC168) (Citrobacter freundii biotype 4280)Imported
Taxonomic identifieri637910 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeCitrobacter
Proteomesi
  • UP000001889 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_500303655725 – 676Sequence analysisAdd BLAST652

Interactioni

Protein-protein interaction databases

STRINGi637910.ROD_42381.

Structurei

3D structure databases

ProteinModelPortaliD2TJT7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini193 – 637AamyInterPro annotationAdd BLAST445

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4107T9C. Bacteria.
COG0366. LUCA.
HOGENOMiHOG000273912.
KOiK01176.
OMAiDKVMVVW.
OrthoDBiPOG091H07J7.

Family and domain databases

InterProiView protein in InterPro
IPR014635. A_amylase_MalS.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

D2TJT7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLAAVTLAL LPAMGIASSW TSQGFPPFTA GGTGKFVSQT ALTKGTRPLL
60 70 80 90 100
LNFDQQCWQP ADAVKLNQML SLKPCEGAPP QWRLFKDGSY TLEIDTRSGT
110 120 130 140 150
PTLMITIQNE AEPAARVIRQ CPKWDGSPLT LEVAQTFPEG AVVRDFYSQQ
160 170 180 190 200
TATVKEGRIT LQPAPDSNGL LLLERAETNA PAPFDWHNAT VYFVLTDRFV
210 220 230 240 250
NGDPTNDHSY GRHKDGMEEI GTFHGGDLRG LTSKLDYLQQ LGVNALWISA
260 270 280 290 300
PFEQIHGWVG GGAKGDFPHY AYHGYYTQDW TRLDANMGNE EDLRALVDGA
310 320 330 340 350
HQRGIRVLFD VVMNHTGYAT LADMQEFNFG ALYLTGDELK KTLGERWTDW
360 370 380 390 400
KPGAGQNWHS FNDYINFSDK AAWEKWWGKA WIRTDIGDYD SPGFDDLTMS
410 420 430 440 450
LAFLPDLKTE STVPSGLPVF YQNKADTRAK AIDGYTPRDY LTHWLSQWVR
460 470 480 490 500
DYGIDGFRVD TAKHVELPAW QQLKTQASAA LVEWKKANPD KAPDDKPFWM
510 520 530 540 550
TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCLAN IDPVWQQMAE
560 570 580 590 600
KLQNFNVLSY LSSHDTRLFR EGNDNAAELL LLAPGAVQIF YGDESARPFG
610 620 630 640 650
PTGSDPLQGT RSDMNWQDIS GKFAGNVAHW QRLGQFRARH PAIGAGKQTT
660 670
LTLSQGYGFV RTTGDDSVMV VWAGQR
Length:676
Mass (Da):75,544
Last modified:March 2, 2010 - v1
Checksum:i0EA768D7131C69C4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN543502 Genomic DNA. Translation: CBG90935.1.
RefSeqiWP_012908178.1. NC_013716.1.

Genome annotation databases

EnsemblBacteriaiCBG90935; CBG90935; ROD_42381.
KEGGicro:ROD_42381.

Similar proteinsi

Entry informationi

Entry nameiD2TJT7_CITRI
AccessioniPrimary (citable) accession number: D2TJT7
Entry historyiIntegrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: September 27, 2017
This is version 50 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported