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D2TJT7 (D2TJT7_CITRI) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length676 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1919 Potential EMBL CBG90935.1
Chain20 – 676657 Potential EMBL CBG90935.1
PRO_5000565626

Sequences

Sequence LengthMass (Da)Tools
D2TJT7 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: 0EA768D7131C69C4

FASTA67675,544
        10         20         30         40         50         60 
MKLAAVTLAL LPAMGIASSW TSQGFPPFTA GGTGKFVSQT ALTKGTRPLL LNFDQQCWQP 

        70         80         90        100        110        120 
ADAVKLNQML SLKPCEGAPP QWRLFKDGSY TLEIDTRSGT PTLMITIQNE AEPAARVIRQ 

       130        140        150        160        170        180 
CPKWDGSPLT LEVAQTFPEG AVVRDFYSQQ TATVKEGRIT LQPAPDSNGL LLLERAETNA 

       190        200        210        220        230        240 
PAPFDWHNAT VYFVLTDRFV NGDPTNDHSY GRHKDGMEEI GTFHGGDLRG LTSKLDYLQQ 

       250        260        270        280        290        300 
LGVNALWISA PFEQIHGWVG GGAKGDFPHY AYHGYYTQDW TRLDANMGNE EDLRALVDGA 

       310        320        330        340        350        360 
HQRGIRVLFD VVMNHTGYAT LADMQEFNFG ALYLTGDELK KTLGERWTDW KPGAGQNWHS 

       370        380        390        400        410        420 
FNDYINFSDK AAWEKWWGKA WIRTDIGDYD SPGFDDLTMS LAFLPDLKTE STVPSGLPVF 

       430        440        450        460        470        480 
YQNKADTRAK AIDGYTPRDY LTHWLSQWVR DYGIDGFRVD TAKHVELPAW QQLKTQASAA 

       490        500        510        520        530        540 
LVEWKKANPD KAPDDKPFWM TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCLAN 

       550        560        570        580        590        600 
IDPVWQQMAE KLQNFNVLSY LSSHDTRLFR EGNDNAAELL LLAPGAVQIF YGDESARPFG 

       610        620        630        640        650        660 
PTGSDPLQGT RSDMNWQDIS GKFAGNVAHW QRLGQFRARH PAIGAGKQTT LTLSQGYGFV 

       670 
RTTGDDSVMV VWAGQR 

« Hide

References

[1]"The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli."
Petty N.K., Bulgin R., Crepin V.F., Cerdeno-Tarraga A.M., Schroeder G.N., Quail M.A., Lennard N., Corton C., Barron A., Clark L., Toribio A.L., Parkhill J., Dougan G., Frankel G., Thomson N.R.
J. Bacteriol. 192:525-538(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ICC168 EMBL CBG90935.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN543502 Genomic DNA. Translation: CBG90935.1.
RefSeqYP_003367652.1. NC_013716.1.

3D structure databases

ProteinModelPortalD2TJT7.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBG90935; CBG90935; ROD_42381.
GeneID8712824.
KEGGcro:ROD_42381.
PATRIC32032124. VBICitRod33214_4017.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000273912.
KOK01176.
OMAGQNWHSF.

Enzyme and pathway databases

BioCycCROD637910:GJIG-4282-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameD2TJT7_CITRI
AccessionPrimary (citable) accession number: D2TJT7
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: October 16, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)