SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

D2TJT7

- D2TJT7_CITRI

UniProt

D2TJT7 - D2TJT7_CITRI

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: Alpha-amylase
Gene
malS, ROD_42381
Organism
Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype 4280)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciCROD637910:GJIG-4282-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Name:malSImported
Ordered Locus Names:ROD_42381Imported
OrganismiCitrobacter rodentium (strain ICC168) (Citrobacter freundii biotype 4280)Imported
Taxonomic identifieri637910 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeCitrobacter
ProteomesiUP000001889: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919 PredictedImported
Add
BLAST
Chaini20 – 676657 PredictedImported
PRO_5000565626Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliD2TJT7.

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000273912.
KOiK01176.
OMAiGQNWHSF.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

D2TJT7-1 [UniParc]FASTAAdd to Basket

« Hide

MKLAAVTLAL LPAMGIASSW TSQGFPPFTA GGTGKFVSQT ALTKGTRPLL    50
LNFDQQCWQP ADAVKLNQML SLKPCEGAPP QWRLFKDGSY TLEIDTRSGT 100
PTLMITIQNE AEPAARVIRQ CPKWDGSPLT LEVAQTFPEG AVVRDFYSQQ 150
TATVKEGRIT LQPAPDSNGL LLLERAETNA PAPFDWHNAT VYFVLTDRFV 200
NGDPTNDHSY GRHKDGMEEI GTFHGGDLRG LTSKLDYLQQ LGVNALWISA 250
PFEQIHGWVG GGAKGDFPHY AYHGYYTQDW TRLDANMGNE EDLRALVDGA 300
HQRGIRVLFD VVMNHTGYAT LADMQEFNFG ALYLTGDELK KTLGERWTDW 350
KPGAGQNWHS FNDYINFSDK AAWEKWWGKA WIRTDIGDYD SPGFDDLTMS 400
LAFLPDLKTE STVPSGLPVF YQNKADTRAK AIDGYTPRDY LTHWLSQWVR 450
DYGIDGFRVD TAKHVELPAW QQLKTQASAA LVEWKKANPD KAPDDKPFWM 500
TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCLAN IDPVWQQMAE 550
KLQNFNVLSY LSSHDTRLFR EGNDNAAELL LLAPGAVQIF YGDESARPFG 600
PTGSDPLQGT RSDMNWQDIS GKFAGNVAHW QRLGQFRARH PAIGAGKQTT 650
LTLSQGYGFV RTTGDDSVMV VWAGQR 676
Length:676
Mass (Da):75,544
Last modified:March 2, 2010 - v1
Checksum:i0EA768D7131C69C4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN543502 Genomic DNA. Translation: CBG90935.1.
RefSeqiWP_012908178.1. NC_013716.1.
YP_003367652.1. NC_013716.1.

Genome annotation databases

EnsemblBacteriaiCBG90935; CBG90935; ROD_42381.
GeneIDi8712824.
KEGGicro:ROD_42381.
PATRICi32032124. VBICitRod33214_4017.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN543502 Genomic DNA. Translation: CBG90935.1 .
RefSeqi WP_012908178.1. NC_013716.1.
YP_003367652.1. NC_013716.1.

3D structure databases

ProteinModelPortali D2TJT7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBG90935 ; CBG90935 ; ROD_42381 .
GeneIDi 8712824.
KEGGi cro:ROD_42381.
PATRICi 32032124. VBICitRod33214_4017.

Phylogenomic databases

HOGENOMi HOG000273912.
KOi K01176.
OMAi GQNWHSF.

Enzyme and pathway databases

BioCyci CROD637910:GJIG-4282-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli."
    Petty N.K., Bulgin R., Crepin V.F., Cerdeno-Tarraga A.M., Schroeder G.N., Quail M.A., Lennard N., Corton C., Barron A., Clark L., Toribio A.L., Parkhill J., Dougan G., Frankel G., Thomson N.R.
    J. Bacteriol. 192:525-538(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ICC168Imported.

Entry informationi

Entry nameiD2TJT7_CITRI
AccessioniPrimary (citable) accession number: D2TJT7
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: September 3, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi