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D2TIL6 (D2TIL6_CITRI) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.3.1.17 EMBL CBG89578.1
Gene names
Name:sdaB EMBL CBG89578.1
Ordered Locus Names:ROD_28371 EMBL CBG89578.1
OrganismCitrobacter rodentium (strain ICC168) (Citrobacter freundii biotype 4280) [Complete proteome] [HAMAP] EMBL CBG89578.1
Taxonomic identifier637910 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeCitrobacter

Protein attributes

Sequence length455 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL CBG89578.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processgluconeogenesis

Inferred from electronic annotation. Source: InterPro

   Molecular_function4 iron, 4 sulfur cluster binding

Inferred from electronic annotation. Source: InterPro

L-serine ammonia-lyase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D2TIL6 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: 852A7411D62FEC90

FASTA45548,752
        10         20         30         40         50         60 
MISVFDIFKI GIGPSSSHTV GPMKAGKQFT DDLIARHLLT DVTRVVVDVY GSLSLTGKGH 

        70         80         90        100        110        120 
HTDIAIIMGL AGNLPDTVDI DAIPSFIQDV NTHGRLLLAN GQHEVEFPVD KCMNFHADNL 

       130        140        150        160        170        180 
SLHENGMRIT ALAGETVLYS QTYYSIGGGF IVDEEHFGLP NSAPVNVPYP YKSAADLQRH 

       190        200        210        220        230        240 
CQETGLSLSG LMMQNELALH SKEELEQHFA SVWEVMRSGI ERGISTEGVL PGKLRVPRRA 

       250        260        270        280        290        300 
AALRRMLVSQ DKTTTDPMAV VDWINMFALA VNEENAAGGR VVTAPTNGAC GIVPAVLAYY 

       310        320        330        340        350        360 
DKFIREVNAN SLARYMLVAS AIGSLYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELLGG 

       370        380        390        400        410        420 
SPAQVCIAAE IGMEHNLGLT CDPVAGQVQV PCIERNAIAS VKAVNAARMA LRRTSEPRVC 

       430        440        450 
LDKVIETMYE TGKDMNAKYR ETSRGGLAMK IVACD 

« Hide

References

[1]"The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli."
Petty N.K., Bulgin R., Crepin V.F., Cerdeno-Tarraga A.M., Schroeder G.N., Quail M.A., Lennard N., Corton C., Barron A., Clark L., Toribio A.L., Parkhill J., Dougan G., Frankel G., Thomson N.R.
J. Bacteriol. 192:525-538(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ICC168 EMBL CBG89578.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN543502 Genomic DNA. Translation: CBG89578.1.
RefSeqYP_003366361.1. NC_013716.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBG89578; CBG89578; ROD_28371.
GeneID8714731.
KEGGcro:ROD_28371.
PATRIC32029467. VBICitRod33214_2734.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000036732.
KOK01752.
OMALENELTW.

Enzyme and pathway databases

BioCycCROD637910:GJIG-2875-MONOMER.

Family and domain databases

InterProIPR004644. Fe-S_L-Ser_mono.
IPR005130. Ser_deHydtase-like_asu.
IPR005131. Ser_deHydtase_bsu.
[Graphical view]
PfamPF03313. SDH_alpha. 1 hit.
PF03315. SDH_beta. 1 hit.
[Graphical view]
TIGRFAMsTIGR00720. sda_mono. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD2TIL6_CITRI
AccessionPrimary (citable) accession number: D2TIL6
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: October 16, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)