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D2TIL6

- D2TIL6_CITRI

UniProt

D2TIL6 - D2TIL6_CITRI

Protein
Submitted name:

L-serine dehydratase 2 (L-serine deaminase 2)

Gene

sdaB

Organism
Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype 4280)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (02 Mar 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 4 iron, 4 sulfur cluster binding Source: InterPro
    2. L-serine ammonia-lyase activity Source: UniProtKB-EC

    GO - Biological processi

    1. gluconeogenesis Source: InterPro

    Keywords - Molecular functioni

    LyaseImported

    Enzyme and pathway databases

    BioCyciCROD637910:GJIG-2875-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    L-serine dehydratase 2 (L-serine deaminase 2)Imported (EC:4.3.1.17Imported)
    Gene namesi
    Name:sdaBImported
    Ordered Locus Names:ROD_28371Imported
    OrganismiCitrobacter rodentium (strain ICC168) (Citrobacter freundii biotype 4280)Imported
    Taxonomic identifieri637910 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeCitrobacter
    ProteomesiUP000001889: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000036732.
    KOiK01752.
    OMAiFIRPVNE.

    Family and domain databases

    Gene3Di3.30.1330.90. 1 hit.
    InterProiIPR029009. ASB_dom.
    IPR004644. Fe-S_L-Ser_mono.
    IPR005130. Ser_deHydtase-like_asu.
    IPR005131. Ser_deHydtase_bsu.
    [Graphical view]
    PfamiPF03313. SDH_alpha. 1 hit.
    PF03315. SDH_beta. 1 hit.
    [Graphical view]
    SUPFAMiSSF143548. SSF143548. 1 hit.
    TIGRFAMsiTIGR00720. sda_mono. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D2TIL6-1 [UniParc]FASTAAdd to Basket

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    MISVFDIFKI GIGPSSSHTV GPMKAGKQFT DDLIARHLLT DVTRVVVDVY    50
    GSLSLTGKGH HTDIAIIMGL AGNLPDTVDI DAIPSFIQDV NTHGRLLLAN 100
    GQHEVEFPVD KCMNFHADNL SLHENGMRIT ALAGETVLYS QTYYSIGGGF 150
    IVDEEHFGLP NSAPVNVPYP YKSAADLQRH CQETGLSLSG LMMQNELALH 200
    SKEELEQHFA SVWEVMRSGI ERGISTEGVL PGKLRVPRRA AALRRMLVSQ 250
    DKTTTDPMAV VDWINMFALA VNEENAAGGR VVTAPTNGAC GIVPAVLAYY 300
    DKFIREVNAN SLARYMLVAS AIGSLYKMNA SISGAEVGCQ GEVGVACSMA 350
    AAGLAELLGG SPAQVCIAAE IGMEHNLGLT CDPVAGQVQV PCIERNAIAS 400
    VKAVNAARMA LRRTSEPRVC LDKVIETMYE TGKDMNAKYR ETSRGGLAMK 450
    IVACD 455
    Length:455
    Mass (Da):48,752
    Last modified:March 2, 2010 - v1
    Checksum:i852A7411D62FEC90
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN543502 Genomic DNA. Translation: CBG89578.1.
    RefSeqiWP_012906985.1. NC_013716.1.
    YP_003366361.1. NC_013716.1.

    Genome annotation databases

    EnsemblBacteriaiCBG89578; CBG89578; ROD_28371.
    GeneIDi8714731.
    KEGGicro:ROD_28371.
    PATRICi32029467. VBICitRod33214_2734.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN543502 Genomic DNA. Translation: CBG89578.1 .
    RefSeqi WP_012906985.1. NC_013716.1.
    YP_003366361.1. NC_013716.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBG89578 ; CBG89578 ; ROD_28371 .
    GeneIDi 8714731.
    KEGGi cro:ROD_28371.
    PATRICi 32029467. VBICitRod33214_2734.

    Phylogenomic databases

    HOGENOMi HOG000036732.
    KOi K01752.
    OMAi FIRPVNE.

    Enzyme and pathway databases

    BioCyci CROD637910:GJIG-2875-MONOMER.

    Family and domain databases

    Gene3Di 3.30.1330.90. 1 hit.
    InterProi IPR029009. ASB_dom.
    IPR004644. Fe-S_L-Ser_mono.
    IPR005130. Ser_deHydtase-like_asu.
    IPR005131. Ser_deHydtase_bsu.
    [Graphical view ]
    Pfami PF03313. SDH_alpha. 1 hit.
    PF03315. SDH_beta. 1 hit.
    [Graphical view ]
    SUPFAMi SSF143548. SSF143548. 1 hit.
    TIGRFAMsi TIGR00720. sda_mono. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli."
      Petty N.K., Bulgin R., Crepin V.F., Cerdeno-Tarraga A.M., Schroeder G.N., Quail M.A., Lennard N., Corton C., Barron A., Clark L., Toribio A.L., Parkhill J., Dougan G., Frankel G., Thomson N.R.
      J. Bacteriol. 192:525-538(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ICC168Imported.

    Entry informationi

    Entry nameiD2TIL6_CITRI
    AccessioniPrimary (citable) accession number: D2TIL6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 2, 2010
    Last sequence update: March 2, 2010
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3