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D2THJ1 (D2THJ1_CITRI) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length173 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393

Cofactor

Binds 1 copper ion per subunit By similarity. RuleBase RU000393

Binds 1 zinc ion per subunit By similarity. RuleBase RU000393

Sequence similarities

Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1919 Potential EMBL CBG88185.1
Chain20 – 173154 Potential EMBL CBG88185.1
PRO_5000565473

Sequences

Sequence LengthMass (Da)Tools
D2THJ1 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: 9A5AFE2F21AB2700

FASTA17317,778
        10         20         30         40         50         60 
MKRLSLAVLT LLACTGAQAA SEKVEMNLVT AQGIGQSIGE VTINETEKGL EFTPDLKALP 

        70         80         90        100        110        120 
PGEHGFHLHA NGSCEPAMKD GKASAAEAAG GHYDPHKTGK HAGPDGDGHL GDLPVLVVNN 

       130        140        150        160        170 
EGKAVTPVTA SRLKSLDEIK DKALMIHVGG DNMSDQPKPL GGGGARFACG VIK 

« Hide

References

[1]"The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli."
Petty N.K., Bulgin R., Crepin V.F., Cerdeno-Tarraga A.M., Schroeder G.N., Quail M.A., Lennard N., Corton C., Barron A., Clark L., Toribio A.L., Parkhill J., Dougan G., Frankel G., Thomson N.R.
J. Bacteriol. 192:525-538(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ICC168 EMBL CBG88185.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN543502 Genomic DNA. Translation: CBG88185.1.
RefSeqYP_003365005.1. NC_013716.1.

3D structure databases

ProteinModelPortalD2THJ1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBG88185; CBG88185; ROD_14221.
GeneID8710785.
KEGGcro:ROD_14221.
PATRIC32026731. VBICitRod33214_1391.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000263449.
KOK04565.
OMADHPKPLG.

Enzyme and pathway databases

BioCycCROD637910:GJIG-1440-MONOMER.

Family and domain databases

Gene3D2.60.40.200. 1 hit.
InterProIPR024134. SOD_Cu/Zn_/chaperone.
IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERPTHR10003. PTHR10003. 1 hit.
PfamPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMSSF49329. SSF49329. 1 hit.
PROSITEPS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2THJ1_CITRI
AccessionPrimary (citable) accession number: D2THJ1
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: October 16, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)