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Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

amyA

Organism
Erwinia pyrifoliae (strain DSM 12163 / CIP 106111 / Ep16/96)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei237 – 2371NucleophileUniRule annotation
Active sitei267 – 2671Proton donorUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciEPYR644651:GLCX-1660-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Name:amyAImported
Ordered Locus Names:EPYR_01608Imported
OrganismiErwinia pyrifoliae (strain DSM 12163 / CIP 106111 / Ep16/96)Imported
Taxonomic identifieri644651 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeErwinia
ProteomesiUP000008690: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD2T9M0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D2T9M0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSMRNLTLLQ FFHWYYPTGG KLWPEAAERA PWLAEMGISA VWLPPAYKGE
60 70 80 90 100
SGGYSVGYDS YDLFDLGEFD QKGSRATKYG DKQQLLHAVE TLKAHGVGVL
110 120 130 140 150
LDVVLNHKMG ADEKEQIQVN RVNPDNREEI DPEVLEAEAW TRFTFPARRG
160 170 180 190 200
QYSQFTWDYK CFSGVDHIEN PDENGVFKIV NDYTGEGWNQ QVDDELGNFD
210 220 230 240 250
YLMGANIDFR NHAVTEELKY WARWVMDEVH CSGFRLDAVK HIPAWFYKEW
260 270 280 290 300
IEHVQEVAEE PLFIVAEYWS HEVDKLQQYI HQVEGKTMLF DAPLQMNFHR
310 320 330 340 350
ASKQGADYDL SQIFTNTLVA ADPWHAVTLV ANHDTQPLQA LEAPVEPWFK
360 370 380 390 400
PLAYALILLR ENGVPVLFYP DLFGASYEDE GNDGEQYQID IPIIAELEAL
410 420 430 440 450
VRARQLYAHG AQREWFDNPD CIAFSRSGTE ELPGCVVIMS NSGAGEKTLE
460 470 480 490 500
LGGNFAGKQW YDYLGHVADR INSDEQGTAV FRCQPGSVSV WVIEQQPVAD
Length:500
Mass (Da):57,012
Last modified:March 2, 2010 - v1
Checksum:i516A06932E22A591
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN392235 Genomic DNA. Translation: CAY73988.1.
RefSeqiYP_005802359.1. NC_017390.1.

Genome annotation databases

EnsemblBacteriaiCAY73988; CAY73988; EPYR_01608.
GeneIDi12937164.
KEGGiepr:EPYR_01608.
PATRICi36676866. VBIErwPyr40668_1484.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN392235 Genomic DNA. Translation: CAY73988.1.
RefSeqiYP_005802359.1. NC_017390.1.

3D structure databases

ProteinModelPortaliD2T9M0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAY73988; CAY73988; EPYR_01608.
GeneIDi12937164.
KEGGiepr:EPYR_01608.
PATRICi36676866. VBIErwPyr40668_1484.

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.

Enzyme and pathway databases

BioCyciEPYR644651:GLCX-1660-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the fire blight pathogen Erwinia pyrifoliae DSM 12163T and comparative genomic insights into plant pathogenicity."
    Smits T.H., Jaenicke S., Rezzonico F., Kamber T., Goesmann A., Frey J.E., Duffy B.
    BMC Genomics 11:2-2(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 12163 / CIP 106111 / Ep16/96Imported.

Entry informationi

Entry nameiD2T9M0_ERWP6
AccessioniPrimary (citable) accession number: D2T9M0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: February 4, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.