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D2T9M0 (D2T9M0_ERWP6) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.1 EMBL CAY73988.1
Gene names
Name:amyA EMBL CAY73988.1
Ordered Locus Names:EPYR_01608 EMBL CAY73988.1
OrganismErwinia pyrifoliae (strain DSM 12163 / CIP 106111 / Ep16/96) [Complete proteome] [HAMAP] EMBL CAY73988.1
Taxonomic identifier644651 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeErwinia

Protein attributes

Sequence length500 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL CAY73988.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

calcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D2T9M0 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: 516A06932E22A591

FASTA50057,012
        10         20         30         40         50         60 
MSMRNLTLLQ FFHWYYPTGG KLWPEAAERA PWLAEMGISA VWLPPAYKGE SGGYSVGYDS 

        70         80         90        100        110        120 
YDLFDLGEFD QKGSRATKYG DKQQLLHAVE TLKAHGVGVL LDVVLNHKMG ADEKEQIQVN 

       130        140        150        160        170        180 
RVNPDNREEI DPEVLEAEAW TRFTFPARRG QYSQFTWDYK CFSGVDHIEN PDENGVFKIV 

       190        200        210        220        230        240 
NDYTGEGWNQ QVDDELGNFD YLMGANIDFR NHAVTEELKY WARWVMDEVH CSGFRLDAVK 

       250        260        270        280        290        300 
HIPAWFYKEW IEHVQEVAEE PLFIVAEYWS HEVDKLQQYI HQVEGKTMLF DAPLQMNFHR 

       310        320        330        340        350        360 
ASKQGADYDL SQIFTNTLVA ADPWHAVTLV ANHDTQPLQA LEAPVEPWFK PLAYALILLR 

       370        380        390        400        410        420 
ENGVPVLFYP DLFGASYEDE GNDGEQYQID IPIIAELEAL VRARQLYAHG AQREWFDNPD 

       430        440        450        460        470        480 
CIAFSRSGTE ELPGCVVIMS NSGAGEKTLE LGGNFAGKQW YDYLGHVADR INSDEQGTAV 

       490        500 
FRCQPGSVSV WVIEQQPVAD 

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References

[1]"Complete genome sequence of the fire blight pathogen Erwinia pyrifoliae DSM 12163T and comparative genomic insights into plant pathogenicity."
Smits T.H., Jaenicke S., Rezzonico F., Kamber T., Goesmann A., Frey J.E., Duffy B.
BMC Genomics 11:2-2(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 12163 / CIP 106111 / Ep16/96.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN392235 Genomic DNA. Translation: CAY73988.1.
RefSeqYP_005802359.1. NC_017390.1.

3D structure databases

ProteinModelPortalD2T9M0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAY73988; CAY73988; EPYR_01608.
GeneID12937164.
KEGGepr:EPYR_01608.
PATRIC36676866. VBIErwPyr40668_1484.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000094847.
KOK01176.

Enzyme and pathway databases

BioCycEPYR644651:GLCX-1660-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD2T9M0_ERWP6
AccessionPrimary (citable) accession number: D2T9M0
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: October 16, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)